Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 AC092850.2-201ENST00000623821 2697 ntBASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 NTF6B-201ENST00000591913 560 ntBASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 AL356309.3-201ENST00000624132 1934 ntBASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 AC022532.1-201ENST00000624563 1728 ntBASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC00242Q5T6M2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.4□□□□□ -0.59
LINC00242Q5T6M2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.59
LINC00242Q5T6M2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC00242Q5T6M2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC00242Q5T6M2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AL590787.1-201ENST00000568856 1315 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 KRT8P39-201ENST00000396270 1433 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 RCN1P2-201ENST00000398357 915 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 CHCHD2P8-201ENST00000429873 447 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 MINOS1P3-201ENST00000457048 203 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 POU5F1P6-201ENST00000466990 990 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AC096582.2-201ENST00000510860 516 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AC022616.7-201ENST00000525383 220 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AL136038.3-201ENST00000561909 1096 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 REXO1L8P-201ENST00000604378 1897 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AL590326.2-201ENST00000625139 305 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 AC066615.1-201ENST00000640911 628 ntBASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00242Q5T6M2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms