Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
TNNI3KQ59H18 OR6D1P-202ENST00000641007 5290 ntBASIC20.19■□□□□ 0.82
TNNI3KQ59H18 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 PMS2P2-201ENST00000425039 1128 ntBASIC20.19■□□□□ 0.82
TNNI3KQ59H18 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 SPDYE14P-201ENST00000442619 822 ntBASIC20.19■□□□□ 0.82
TNNI3KQ59H18 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 AC093028.1-201ENST00000622998 982 ntBASIC20.19■□□□□ 0.82
TNNI3KQ59H18 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI3KQ59H18 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.18■□□□□ 0.82
TNNI3KQ59H18 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI3KQ59H18 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 ALG1L8P-201ENST00000533887 760 ntBASIC20.17■□□□□ 0.82
TNNI3KQ59H18 AC026150.2-201ENST00000564693 1156 ntBASIC20.17■□□□□ 0.82
TNNI3KQ59H18 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 SPTSSB-204ENST00000617024 1292 ntBASIC20.17■□□□□ 0.82
TNNI3KQ59H18 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI3KQ59H18 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms