Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CHRFAM7AQ494W8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 TSPY26P-202ENST00000565928 3884 ntBASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 MYCLP1-201ENST00000372451 1075 ntBASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 FAM8A3P-201ENST00000427218 844 ntBASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 AC244107.1-201ENST00000442033 332 ntBASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 AC009947.1-201ENST00000444350 727 ntBASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 AC064836.3-201ENST00000607928 673 ntBASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRFAM7AQ494W8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 CICP6-201ENST00000457191 2729 ntBASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 RNF216P1-203ENST00000404404 2427 ntBASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AC254562.1-201ENST00000417586 456 ntBASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AC011467.4-201ENST00000594891 528 ntBASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRFAM7AQ494W8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms