Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTC1Q2NKJ3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 CICP6-201ENST00000457191 2729 ntBASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 AC105020.1-201ENST00000435356 2205 ntBASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 AC142381.1-201ENST00000426099 345 ntBASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 API5-211ENST00000534695 560 ntTSL 5 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 RARRES2P9-201ENST00000565168 469 ntBASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 AL138918.1-201ENST00000568306 659 ntBASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.71■□□□□ 0.43
CTC1Q2NKJ3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTC1Q2NKJ3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CTC1Q2NKJ3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 AL353779.1-201ENST00000434793 351 ntBASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 HILS1-202ENST00000545329 423 ntBASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 AC010336.2-201ENST00000564226 506 ntBASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 AC009407.1-201ENST00000568958 598 ntBASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTC1Q2NKJ3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 AC138969.3-201ENST00000546612 1459 ntBASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 AC138932.2-201ENST00000548268 1459 ntBASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 AC126755.4-201ENST00000549796 1459 ntBASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 AC106886.4-201ENST00000623557 2502 ntBASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CTC1Q2NKJ3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms