Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.88□□□□□ -0.03
SCN1BQ07699 AC013268.4-201ENST00000637413 2228 ntBASIC14.88□□□□□ -0.03
SCN1BQ07699 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.88□□□□□ -0.03
SCN1BQ07699 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.88□□□□□ -0.03
SCN1BQ07699 AL645929.1-201ENST00000420084 975 ntBASIC14.88□□□□□ -0.03
SCN1BQ07699 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.88□□□□□ -0.03
SCN1BQ07699 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.88□□□□□ -0.03
SCN1BQ07699 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.88□□□□□ -0.03
SCN1BQ07699 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.88□□□□□ -0.03
SCN1BQ07699 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 AC083849.1-201ENST00000615227 514 ntBASIC14.88□□□□□ -0.03
SCN1BQ07699 OR2I1P-210ENST00000642037 4691 ntBASIC14.88□□□□□ -0.03
SCN1BQ07699 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SCN1BQ07699 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SCN1BQ07699 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SCN1BQ07699 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SCN1BQ07699 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.88□□□□□ -0.03
SCN1BQ07699 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCN1BQ07699 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SCN1BQ07699 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.87□□□□□ -0.03
SCN1BQ07699 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 AL603832.2-201ENST00000566195 2125 ntBASIC14.87□□□□□ -0.03
SCN1BQ07699 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
SCN1BQ07699 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SCN1BQ07699 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.87□□□□□ -0.03
SCN1BQ07699 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.87□□□□□ -0.03
SCN1BQ07699 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 TSPY22P-201ENST00000427496 604 ntBASIC14.87□□□□□ -0.03
SCN1BQ07699 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.87□□□□□ -0.03
SCN1BQ07699 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
SCN1BQ07699 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.87□□□□□ -0.03
SCN1BQ07699 AC124864.1-201ENST00000623408 392 ntBASIC14.87□□□□□ -0.03
SCN1BQ07699 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.87□□□□□ -0.03
SCN1BQ07699 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCN1BQ07699 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.87□□□□□ -0.03
SCN1BQ07699 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SCN1BQ07699 SBF1P1-201ENST00000444527 5631 ntBASIC14.86□□□□□ -0.03
SCN1BQ07699 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SCN1BQ07699 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.86□□□□□ -0.03
SCN1BQ07699 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.86□□□□□ -0.03
SCN1BQ07699 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SCN1BQ07699 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SCN1BQ07699 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.86□□□□□ -0.03
SCN1BQ07699 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.86□□□□□ -0.03
SCN1BQ07699 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms