Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.43□□□□□ -0.1
UBA52P62987 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 AC092183.1-201ENST00000469884 875 ntBASIC14.43□□□□□ -0.1
UBA52P62987 DUTP2-201ENST00000519164 463 ntBASIC14.43□□□□□ -0.1
UBA52P62987 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.43□□□□□ -0.1
UBA52P62987 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.43□□□□□ -0.1
UBA52P62987 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.43□□□□□ -0.1
UBA52P62987 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.43□□□□□ -0.1
UBA52P62987 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 AC092171.3-201ENST00000610122 2651 ntBASIC14.43□□□□□ -0.1
UBA52P62987 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 SDHAP2-201ENST00000455183 2001 ntBASIC14.42□□□□□ -0.1
UBA52P62987 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.42□□□□□ -0.1
UBA52P62987 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBA52P62987 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
UBA52P62987 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 RNF216P1-203ENST00000404404 2427 ntBASIC14.42□□□□□ -0.1
UBA52P62987 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBA52P62987 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.42□□□□□ -0.1
UBA52P62987 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.42□□□□□ -0.1
UBA52P62987 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBA52P62987 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.42□□□□□ -0.1
UBA52P62987 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.42□□□□□ -0.1
UBA52P62987 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.42□□□□□ -0.1
UBA52P62987 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.42□□□□□ -0.1
UBA52P62987 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
UBA52P62987 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.42□□□□□ -0.1
UBA52P62987 AC009154.2-201ENST00000621177 724 ntBASIC14.42□□□□□ -0.1
UBA52P62987 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.42□□□□□ -0.1
UBA52P62987 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
UBA52P62987 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
UBA52P62987 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBA52P62987 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 INTS4P1-201ENST00000438455 1935 ntBASIC14.42□□□□□ -0.1
UBA52P62987 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBA52P62987 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBA52P62987 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBA52P62987 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.42□□□□□ -0.1
UBA52P62987 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
UBA52P62987 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 MTCL1P1-201ENST00000446207 792 ntBASIC14.41□□□□□ -0.1
UBA52P62987 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.41□□□□□ -0.1
UBA52P62987 AC011467.2-201ENST00000598425 242 ntBASIC14.41□□□□□ -0.1
UBA52P62987 AL138831.2-201ENST00000606564 490 ntBASIC14.41□□□□□ -0.1
UBA52P62987 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
UBA52P62987 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
UBA52P62987 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
UBA52P62987 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
UBA52P62987 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBA52P62987 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.41□□□□□ -0.1
UBA52P62987 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms