Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.18■□□□□ 0.02
CXCR4P61073 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.18■□□□□ 0.02
CXCR4P61073 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CXCR4P61073 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CXCR4P61073 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CXCR4P61073 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CXCR4P61073 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CXCR4P61073 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.18■□□□□ 0.02
CXCR4P61073 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CXCR4P61073 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CXCR4P61073 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CXCR4P61073 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.18■□□□□ 0.02
CXCR4P61073 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.18■□□□□ 0.02
CXCR4P61073 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.18■□□□□ 0.02
CXCR4P61073 AC246785.2-201ENST00000432512 513 ntBASIC15.18■□□□□ 0.02
CXCR4P61073 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.18■□□□□ 0.02
CXCR4P61073 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
CXCR4P61073 LINC01238-205ENST00000567549 1107 ntBASIC15.18■□□□□ 0.02
CXCR4P61073 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
CXCR4P61073 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.18■□□□□ 0.02
CXCR4P61073 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CXCR4P61073 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.18■□□□□ 0.02
CXCR4P61073 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
CXCR4P61073 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.18■□□□□ 0.02
CXCR4P61073 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.18■□□□□ 0.02
CXCR4P61073 AC006486.2-201ENST00000624246 2199 ntBASIC15.18■□□□□ 0.02
CXCR4P61073 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CXCR4P61073 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 AL671710.1-201ENST00000610245 2349 ntBASIC15.17■□□□□ 0.02
CXCR4P61073 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.17■□□□□ 0.02
CXCR4P61073 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.17■□□□□ 0.02
CXCR4P61073 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.17■□□□□ 0.02
CXCR4P61073 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 SNX33P1-201ENST00000592116 1762 ntBASIC15.17■□□□□ 0.02
CXCR4P61073 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.17■□□□□ 0.02
CXCR4P61073 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.17■□□□□ 0.02
CXCR4P61073 VENTXP7-201ENST00000475503 772 ntBASIC15.17■□□□□ 0.02
CXCR4P61073 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CXCR4P61073 KRT8P26-201ENST00000534154 1276 ntBASIC15.17■□□□□ 0.02
CXCR4P61073 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.17■□□□□ 0.02
CXCR4P61073 AD001527.2-201ENST00000622994 785 ntBASIC15.17■□□□□ 0.02
CXCR4P61073 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.17■□□□□ 0.02
CXCR4P61073 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CXCR4P61073 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.17■□□□□ 0.02
CXCR4P61073 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CXCR4P61073 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.17■□□□□ 0.02
CXCR4P61073 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CXCR4P61073 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.17■□□□□ 0.02
CXCR4P61073 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CXCR4P61073 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.16■□□□□ 0.02
CXCR4P61073 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 AC211429.1-201ENST00000415277 523 ntBASIC15.16■□□□□ 0.02
CXCR4P61073 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.16■□□□□ 0.02
CXCR4P61073 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.16■□□□□ 0.02
CXCR4P61073 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.16■□□□□ 0.02
CXCR4P61073 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.16■□□□□ 0.02
CXCR4P61073 LINC01023-201ENST00000606054 436 ntBASIC15.16■□□□□ 0.02
CXCR4P61073 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CXCR4P61073 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.16■□□□□ 0.02
CXCR4P61073 AL512652.2-201ENST00000625156 1716 ntBASIC15.16■□□□□ 0.02
CXCR4P61073 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.16■□□□□ 0.02
CXCR4P61073 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CXCR4P61073 AL031731.1-201ENST00000642131 2094 ntBASIC15.16■□□□□ 0.02
CXCR4P61073 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms