Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KCNQ4P56696 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNQ4P56696 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNQ4P56696 AC020907.1-201ENST00000616460 1350 ntBASIC20.9■□□□□ 0.94
KCNQ4P56696 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 BRWD1P1-201ENST00000401091 371 ntBASIC20.9■□□□□ 0.94
KCNQ4P56696 BOLA2P3-201ENST00000404566 256 ntBASIC20.9■□□□□ 0.94
KCNQ4P56696 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNQ4P56696 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNQ4P56696 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNQ4P56696 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.9■□□□□ 0.94
KCNQ4P56696 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNQ4P56696 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.9■□□□□ 0.94
KCNQ4P56696 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KCNQ4P56696 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
KCNQ4P56696 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ4P56696 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNQ4P56696 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
KCNQ4P56696 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ4P56696 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ4P56696 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ4P56696 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ4P56696 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.89■□□□□ 0.94
KCNQ4P56696 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
KCNQ4P56696 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 KLF2P4-201ENST00000451959 1225 ntBASIC20.89■□□□□ 0.93
KCNQ4P56696 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.89■□□□□ 0.93
KCNQ4P56696 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.89■□□□□ 0.93
KCNQ4P56696 AC025048.3-201ENST00000590609 569 ntBASIC20.89■□□□□ 0.93
KCNQ4P56696 AC233724.13-201ENST00000598383 410 ntBASIC20.89■□□□□ 0.93
KCNQ4P56696 AC005702.4-201ENST00000618393 416 ntBASIC20.89■□□□□ 0.93
KCNQ4P56696 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
KCNQ4P56696 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ4P56696 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.89■□□□□ 0.93
KCNQ4P56696 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
KCNQ4P56696 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
KCNQ4P56696 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KCNQ4P56696 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNQ4P56696 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
KCNQ4P56696 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
KCNQ4P56696 CSF2RBP1-201ENST00000447905 391 ntBASIC20.88■□□□□ 0.93
KCNQ4P56696 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.88■□□□□ 0.93
KCNQ4P56696 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.88■□□□□ 0.93
KCNQ4P56696 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KCNQ4P56696 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 AC024267.1-201ENST00000582320 895 ntBASIC20.88■□□□□ 0.93
KCNQ4P56696 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.88■□□□□ 0.93
KCNQ4P56696 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.88■□□□□ 0.93
KCNQ4P56696 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.88■□□□□ 0.93
KCNQ4P56696 AC013467.2-201ENST00000605472 835 ntBASIC20.88■□□□□ 0.93
KCNQ4P56696 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNQ4P56696 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNQ4P56696 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNQ4P56696 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNQ4P56696 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ4P56696 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNQ4P56696 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
KCNQ4P56696 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNQ4P56696 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNQ4P56696 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms