Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
RAD23BP54727 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.77■□□□□ 0.44
RAD23BP54727 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RAD23BP54727 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
RAD23BP54727 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 AL031731.1-201ENST00000642131 2094 ntBASIC17.77■□□□□ 0.44
RAD23BP54727 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.77■□□□□ 0.44
RAD23BP54727 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.77■□□□□ 0.44
RAD23BP54727 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.77■□□□□ 0.44
RAD23BP54727 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 MCCD1P2-201ENST00000423228 335 ntBASIC17.77■□□□□ 0.44
RAD23BP54727 MIR3909-201ENST00000579518 119 ntBASIC17.77■□□□□ 0.44
RAD23BP54727 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RAD23BP54727 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.77■□□□□ 0.44
RAD23BP54727 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAD23BP54727 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAD23BP54727 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAD23BP54727 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAD23BP54727 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RAD23BP54727 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.77■□□□□ 0.43
RAD23BP54727 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAD23BP54727 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.77■□□□□ 0.43
RAD23BP54727 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RAD23BP54727 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
RAD23BP54727 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RAD23BP54727 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RAD23BP54727 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.76■□□□□ 0.43
RAD23BP54727 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.76■□□□□ 0.43
RAD23BP54727 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 AL513477.1-201ENST00000602865 2407 ntBASIC17.76■□□□□ 0.43
RAD23BP54727 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 PMS2P4-201ENST00000412466 1052 ntBASIC17.76■□□□□ 0.43
RAD23BP54727 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.76■□□□□ 0.43
RAD23BP54727 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RAD23BP54727 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.76■□□□□ 0.43
RAD23BP54727 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.76■□□□□ 0.43
RAD23BP54727 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.76■□□□□ 0.43
RAD23BP54727 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.76■□□□□ 0.43
RAD23BP54727 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.76■□□□□ 0.43
RAD23BP54727 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.76■□□□□ 0.43
RAD23BP54727 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAD23BP54727 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RAD23BP54727 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RAD23BP54727 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAD23BP54727 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAD23BP54727 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAD23BP54727 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAD23BP54727 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.75■□□□□ 0.43
RAD23BP54727 GGT4P-201ENST00000623672 1708 ntBASIC17.75■□□□□ 0.43
RAD23BP54727 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.75■□□□□ 0.43
RAD23BP54727 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
RAD23BP54727 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAD23BP54727 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.75■□□□□ 0.43
RAD23BP54727 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAD23BP54727 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAD23BP54727 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAD23BP54727 AC092474.2-201ENST00000424288 719 ntBASIC17.75■□□□□ 0.43
RAD23BP54727 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.75■□□□□ 0.43
RAD23BP54727 AC109635.5-201ENST00000533593 962 ntBASIC17.75■□□□□ 0.43
RAD23BP54727 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAD23BP54727 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.75■□□□□ 0.43
RAD23BP54727 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
RAD23BP54727 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms