Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.77■□□□□ 0.28
LIMK2P53671 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.77■□□□□ 0.28
LIMK2P53671 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.77■□□□□ 0.28
LIMK2P53671 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.77■□□□□ 0.28
LIMK2P53671 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.77■□□□□ 0.28
LIMK2P53671 AC008667.4-201ENST00000607370 168 ntBASIC16.77■□□□□ 0.28
LIMK2P53671 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
LIMK2P53671 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.77■□□□□ 0.28
LIMK2P53671 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 CICP6-201ENST00000457191 2729 ntBASIC16.77■□□□□ 0.28
LIMK2P53671 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LIMK2P53671 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.77■□□□□ 0.27
LIMK2P53671 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LIMK2P53671 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
LIMK2P53671 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
LIMK2P53671 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LIMK2P53671 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.76■□□□□ 0.27
LIMK2P53671 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
LIMK2P53671 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LIMK2P53671 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.76■□□□□ 0.27
LIMK2P53671 KRT18P2-201ENST00000447938 1258 ntBASIC16.76■□□□□ 0.27
LIMK2P53671 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.76■□□□□ 0.27
LIMK2P53671 AC108073.2-201ENST00000464002 357 ntBASIC16.76■□□□□ 0.27
LIMK2P53671 RPS15P9-201ENST00000494093 319 ntBASIC16.76■□□□□ 0.27
LIMK2P53671 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.76■□□□□ 0.27
LIMK2P53671 IGHV3-65-201ENST00000523210 341 ntBASIC16.76■□□□□ 0.27
LIMK2P53671 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.76■□□□□ 0.27
LIMK2P53671 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LIMK2P53671 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.76■□□□□ 0.27
LIMK2P53671 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.76■□□□□ 0.27
LIMK2P53671 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.76■□□□□ 0.27
LIMK2P53671 AL671710.1-201ENST00000610245 2349 ntBASIC16.76■□□□□ 0.27
LIMK2P53671 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LIMK2P53671 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.76■□□□□ 0.27
LIMK2P53671 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LIMK2P53671 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LIMK2P53671 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
LIMK2P53671 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.75■□□□□ 0.27
LIMK2P53671 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 AC087163.2-201ENST00000457299 853 ntBASIC16.75■□□□□ 0.27
LIMK2P53671 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.75■□□□□ 0.27
LIMK2P53671 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 MIR4492-201ENST00000581627 80 ntBASIC16.75■□□□□ 0.27
LIMK2P53671 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 MPDU1-223ENST00000582151 728 ntBASIC16.75■□□□□ 0.27
LIMK2P53671 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms