Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN2P51788 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN2P51788 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN2P51788 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CLCN2P51788 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLCN2P51788 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLCN2P51788 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CLCN2P51788 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCN2P51788 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN2P51788 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.16■□□□□ 0.18
CLCN2P51788 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CLCN2P51788 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLCN2P51788 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLCN2P51788 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CLCN2P51788 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN2P51788 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.16■□□□□ 0.18
CLCN2P51788 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.16■□□□□ 0.18
CLCN2P51788 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.16■□□□□ 0.18
CLCN2P51788 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CLCN2P51788 MIR1199-201ENST00000621445 119 ntBASIC16.16■□□□□ 0.18
CLCN2P51788 AC116407.3-201ENST00000623905 1129 ntBASIC16.16■□□□□ 0.18
CLCN2P51788 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCN2P51788 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN2P51788 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLCN2P51788 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLCN2P51788 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN2P51788 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 IL9RP2-201ENST00000423948 1312 ntBASIC16.16■□□□□ 0.18
CLCN2P51788 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN2P51788 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLCN2P51788 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN2P51788 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
CLCN2P51788 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 AC243591.1-201ENST00000452967 1364 ntBASIC16.15■□□□□ 0.18
CLCN2P51788 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN2P51788 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCN2P51788 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN2P51788 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN2P51788 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 AC092910.1-201ENST00000482027 1129 ntBASIC16.15■□□□□ 0.18
CLCN2P51788 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCN2P51788 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCN2P51788 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLCN2P51788 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN2P51788 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLCN2P51788 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN2P51788 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 AC097637.2-201ENST00000624096 1997 ntBASIC16.15■□□□□ 0.18
CLCN2P51788 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLCN2P51788 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.14■□□□□ 0.18
CLCN2P51788 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CLCN2P51788 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLCN2P51788 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLCN2P51788 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms