Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.88■□□□□ 0.13
PRIM2P49643 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRIM2P49643 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
PRIM2P49643 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.87■□□□□ 0.13
PRIM2P49643 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.87■□□□□ 0.13
PRIM2P49643 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.87■□□□□ 0.13
PRIM2P49643 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.87■□□□□ 0.13
PRIM2P49643 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.87■□□□□ 0.13
PRIM2P49643 AC026691.1-201ENST00000602502 2017 ntBASIC15.87■□□□□ 0.13
PRIM2P49643 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PRIM2P49643 LINC00895-201ENST00000629028 1637 ntBASIC15.87■□□□□ 0.13
PRIM2P49643 KRT8P49-201ENST00000604166 1432 ntBASIC15.87■□□□□ 0.13
PRIM2P49643 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
PRIM2P49643 LAGE3P1-201ENST00000425356 484 ntBASIC15.87■□□□□ 0.13
PRIM2P49643 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.87■□□□□ 0.13
PRIM2P49643 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.87■□□□□ 0.13
PRIM2P49643 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.87■□□□□ 0.13
PRIM2P49643 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.87■□□□□ 0.13
PRIM2P49643 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.87■□□□□ 0.13
PRIM2P49643 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.87■□□□□ 0.13
PRIM2P49643 AC021087.4-201ENST00000563761 564 ntBASIC15.87■□□□□ 0.13
PRIM2P49643 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.87■□□□□ 0.13
PRIM2P49643 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.87■□□□□ 0.13
PRIM2P49643 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.87■□□□□ 0.13
PRIM2P49643 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PRIM2P49643 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PRIM2P49643 LINC02199-201ENST00000506655 2702 ntBASIC15.87■□□□□ 0.13
PRIM2P49643 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PRIM2P49643 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PRIM2P49643 ALOX12P2-203ENST00000570921 1945 ntBASIC15.86■□□□□ 0.13
PRIM2P49643 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.86■□□□□ 0.13
PRIM2P49643 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.86■□□□□ 0.13
PRIM2P49643 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PRIM2P49643 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 HLA-J-202ENST00000469281 1241 ntBASIC15.86■□□□□ 0.13
PRIM2P49643 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.86■□□□□ 0.13
PRIM2P49643 AC073648.2-201ENST00000510116 352 ntBASIC15.86■□□□□ 0.13
PRIM2P49643 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.86■□□□□ 0.13
PRIM2P49643 AC025062.2-201ENST00000605477 670 ntBASIC15.86■□□□□ 0.13
PRIM2P49643 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.86■□□□□ 0.13
PRIM2P49643 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.86■□□□□ 0.13
PRIM2P49643 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.86■□□□□ 0.13
PRIM2P49643 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.86■□□□□ 0.13
PRIM2P49643 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.86■□□□□ 0.13
PRIM2P49643 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRIM2P49643 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms