Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 IGHV3-47-201ENST00000425060 335 ntBASIC16.39■□□□□ 0.21
SLC1A6P48664 DRAXINP1-201ENST00000437611 948 ntBASIC16.39■□□□□ 0.21
SLC1A6P48664 ABCD1P5-201ENST00000445663 754 ntBASIC16.39■□□□□ 0.21
SLC1A6P48664 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.39■□□□□ 0.21
SLC1A6P48664 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SLC1A6P48664 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC1A6P48664 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 TPSP2-201ENST00000561760 610 ntBASIC16.39■□□□□ 0.21
SLC1A6P48664 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC1A6P48664 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 AL590326.2-201ENST00000625139 305 ntBASIC16.39■□□□□ 0.21
SLC1A6P48664 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC1A6P48664 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC1A6P48664 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A6P48664 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A6P48664 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC1A6P48664 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC1A6P48664 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A6P48664 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A6P48664 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A6P48664 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SLC1A6P48664 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
SLC1A6P48664 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC1A6P48664 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC1A6P48664 AC211429.1-201ENST00000415277 523 ntBASIC16.38■□□□□ 0.21
SLC1A6P48664 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A6P48664 TOB2P1-201ENST00000469761 992 ntBASIC16.38■□□□□ 0.21
SLC1A6P48664 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A6P48664 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 MIR4492-201ENST00000581627 80 ntBASIC16.38■□□□□ 0.21
SLC1A6P48664 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC1A6P48664 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SLC1A6P48664 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
SLC1A6P48664 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC1A6P48664 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A6P48664 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A6P48664 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A6P48664 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SLC1A6P48664 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SLC1A6P48664 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SLC1A6P48664 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 POM121L3P-201ENST00000419331 1163 ntBASIC16.37■□□□□ 0.21
SLC1A6P48664 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC1A6P48664 TSSC2-201ENST00000450217 709 ntBASIC16.37■□□□□ 0.21
SLC1A6P48664 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A6P48664 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SLC1A6P48664 POU5F1P6-201ENST00000466990 990 ntBASIC16.37■□□□□ 0.21
SLC1A6P48664 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.37■□□□□ 0.21
SLC1A6P48664 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC1A6P48664 MPDU1-223ENST00000582151 728 ntBASIC16.37■□□□□ 0.21
SLC1A6P48664 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms