Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TM4SF4P48230 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.62■□□□□ 0.57
TM4SF4P48230 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF4P48230 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF4P48230 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TM4SF4P48230 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TM4SF4P48230 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.62■□□□□ 0.57
TM4SF4P48230 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.62■□□□□ 0.57
TM4SF4P48230 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.62■□□□□ 0.57
TM4SF4P48230 AC134915.1-201ENST00000426461 574 ntBASIC18.62■□□□□ 0.57
TM4SF4P48230 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
TM4SF4P48230 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.62■□□□□ 0.57
TM4SF4P48230 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.62■□□□□ 0.57
TM4SF4P48230 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.62■□□□□ 0.57
TM4SF4P48230 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TM4SF4P48230 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.62■□□□□ 0.57
TM4SF4P48230 AC079328.1-201ENST00000560358 952 ntBASIC18.62■□□□□ 0.57
TM4SF4P48230 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF4P48230 AC124283.3-201ENST00000570869 594 ntBASIC18.62■□□□□ 0.57
TM4SF4P48230 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.62■□□□□ 0.57
TM4SF4P48230 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.62■□□□□ 0.57
TM4SF4P48230 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF4P48230 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.62■□□□□ 0.57
TM4SF4P48230 LINC02012-201ENST00000608206 1725 ntBASIC18.62■□□□□ 0.57
TM4SF4P48230 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF4P48230 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF4P48230 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF4P48230 BICD1-207ENST00000551848 1962 ntBASIC18.62■□□□□ 0.57
TM4SF4P48230 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.62■□□□□ 0.57
TM4SF4P48230 AC009113.1-201ENST00000570267 2443 ntBASIC18.62■□□□□ 0.57
TM4SF4P48230 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM4SF4P48230 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TM4SF4P48230 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF4P48230 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
TM4SF4P48230 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TM4SF4P48230 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 AL512652.2-201ENST00000625156 1716 ntBASIC18.61■□□□□ 0.57
TM4SF4P48230 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF4P48230 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TM4SF4P48230 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.61■□□□□ 0.57
TM4SF4P48230 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TM4SF4P48230 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.61■□□□□ 0.57
TM4SF4P48230 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TM4SF4P48230 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.61■□□□□ 0.57
TM4SF4P48230 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.61■□□□□ 0.57
TM4SF4P48230 AC009486.1-201ENST00000569860 813 ntBASIC18.61■□□□□ 0.57
TM4SF4P48230 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF4P48230 AL365330.1-201ENST00000607459 531 ntBASIC18.61■□□□□ 0.57
TM4SF4P48230 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.61■□□□□ 0.57
TM4SF4P48230 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.61■□□□□ 0.57
TM4SF4P48230 MIR6727-201ENST00000620702 65 ntBASIC18.61■□□□□ 0.57
TM4SF4P48230 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF4P48230 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM4SF4P48230 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.61■□□□□ 0.57
TM4SF4P48230 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TM4SF4P48230 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
TM4SF4P48230 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.6■□□□□ 0.57
TM4SF4P48230 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TM4SF4P48230 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TM4SF4P48230 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TM4SF4P48230 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.6■□□□□ 0.57
TM4SF4P48230 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 MIR326-201ENST00000362220 95 ntBASIC18.6■□□□□ 0.57
TM4SF4P48230 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 MIR663B-201ENST00000408361 115 ntBASIC18.6■□□□□ 0.57
TM4SF4P48230 SOCS2P1-201ENST00000417727 557 ntBASIC18.6■□□□□ 0.57
TM4SF4P48230 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.6■□□□□ 0.57
TM4SF4P48230 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.6■□□□□ 0.57
TM4SF4P48230 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.6■□□□□ 0.57
TM4SF4P48230 FAM86HP-204ENST00000513466 959 ntBASIC18.6■□□□□ 0.57
TM4SF4P48230 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.6■□□□□ 0.57
TM4SF4P48230 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.6■□□□□ 0.57
TM4SF4P48230 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TM4SF4P48230 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms