Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA4P43681 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA4P43681 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA4P43681 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 CROCCP1-201ENST00000426910 5675 ntBASIC16.76■□□□□ 0.27
CHRNA4P43681 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA4P43681 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA4P43681 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA4P43681 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA4P43681 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
CHRNA4P43681 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA4P43681 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA4P43681 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA4P43681 FAM197Y3-203ENST00000618346 717 ntBASIC16.76■□□□□ 0.27
CHRNA4P43681 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA4P43681 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA4P43681 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CHRNA4P43681 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA4P43681 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA4P43681 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA4P43681 PCGF3-213ENST00000620529 1899 ntBASIC16.76■□□□□ 0.27
CHRNA4P43681 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 AL591424.1-201ENST00000442569 1213 ntBASIC16.75■□□□□ 0.27
CHRNA4P43681 POLD2P1-201ENST00000511220 997 ntBASIC16.75■□□□□ 0.27
CHRNA4P43681 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.75■□□□□ 0.27
CHRNA4P43681 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.75■□□□□ 0.27
CHRNA4P43681 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.75■□□□□ 0.27
CHRNA4P43681 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHRNA4P43681 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA4P43681 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CHRNA4P43681 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA4P43681 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA4P43681 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA4P43681 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.74■□□□□ 0.27
CHRNA4P43681 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA4P43681 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.74■□□□□ 0.27
CHRNA4P43681 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHRNA4P43681 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CHRNA4P43681 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.74■□□□□ 0.27
CHRNA4P43681 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA4P43681 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA4P43681 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA4P43681 MIR574-201ENST00000385209 96 ntBASIC16.74■□□□□ 0.27
CHRNA4P43681 AC023274.1-201ENST00000418278 595 ntBASIC16.74■□□□□ 0.27
CHRNA4P43681 AL671883.3-201ENST00000603274 991 ntBASIC16.74■□□□□ 0.27
CHRNA4P43681 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.74■□□□□ 0.27
CHRNA4P43681 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.74■□□□□ 0.27
CHRNA4P43681 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHRNA4P43681 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA4P43681 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CHRNA4P43681 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA4P43681 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRNA4P43681 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms