Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 BCAR1-209ENST00000546196 1340 ntBASIC14.65□□□□□ -0.06
THBS4P35443 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 AC002310.6-201ENST00000624451 1377 ntBASIC14.64□□□□□ -0.07
THBS4P35443 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.64□□□□□ -0.07
THBS4P35443 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.64□□□□□ -0.07
THBS4P35443 AC004832.2-201ENST00000426397 482 ntBASIC14.64□□□□□ -0.07
THBS4P35443 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.64□□□□□ -0.07
THBS4P35443 FAM185BP-201ENST00000443595 716 ntBASIC14.64□□□□□ -0.07
THBS4P35443 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.64□□□□□ -0.07
THBS4P35443 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
THBS4P35443 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.64□□□□□ -0.07
THBS4P35443 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
THBS4P35443 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
THBS4P35443 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.64□□□□□ -0.07
THBS4P35443 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.64□□□□□ -0.07
THBS4P35443 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 AL596257.1-201ENST00000641463 2694 ntBASIC14.64□□□□□ -0.07
THBS4P35443 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.64□□□□□ -0.07
THBS4P35443 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
THBS4P35443 AC129492.6-201ENST00000611383 1305 ntBASIC14.64□□□□□ -0.07
THBS4P35443 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.64□□□□□ -0.07
THBS4P35443 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
THBS4P35443 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
THBS4P35443 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
THBS4P35443 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.63□□□□□ -0.07
THBS4P35443 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.63□□□□□ -0.07
THBS4P35443 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 RHOQP3-201ENST00000437982 621 ntBASIC14.63□□□□□ -0.07
THBS4P35443 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.63□□□□□ -0.07
THBS4P35443 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.63□□□□□ -0.07
THBS4P35443 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.63□□□□□ -0.07
THBS4P35443 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 AC010327.4-202ENST00000591484 748 ntBASIC14.63□□□□□ -0.07
THBS4P35443 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.63□□□□□ -0.07
THBS4P35443 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.63□□□□□ -0.07
THBS4P35443 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
THBS4P35443 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS4P35443 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS4P35443 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS4P35443 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THBS4P35443 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THBS4P35443 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS4P35443 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms