Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.26■□□□□ 0.19
SDHBP21912 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SDHBP21912 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.26■□□□□ 0.19
SDHBP21912 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHBP21912 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SDHBP21912 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SDHBP21912 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.25■□□□□ 0.19
SDHBP21912 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.25■□□□□ 0.19
SDHBP21912 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.25■□□□□ 0.19
SDHBP21912 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SDHBP21912 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.25■□□□□ 0.19
SDHBP21912 RN7SL618P-201ENST00000477850 296 ntBASIC16.25■□□□□ 0.19
SDHBP21912 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SDHBP21912 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SDHBP21912 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.25■□□□□ 0.19
SDHBP21912 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.25■□□□□ 0.19
SDHBP21912 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.25■□□□□ 0.19
SDHBP21912 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.25■□□□□ 0.19
SDHBP21912 MIR6727-201ENST00000620702 65 ntBASIC16.25■□□□□ 0.19
SDHBP21912 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 PHGDH-209ENST00000641074 1780 ntBASIC16.25■□□□□ 0.19
SDHBP21912 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SDHBP21912 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.25■□□□□ 0.19
SDHBP21912 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SDHBP21912 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHBP21912 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.24■□□□□ 0.19
SDHBP21912 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.24■□□□□ 0.19
SDHBP21912 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.24■□□□□ 0.19
SDHBP21912 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SDHBP21912 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 AC046185.3-201ENST00000623228 1824 ntBASIC16.24■□□□□ 0.19
SDHBP21912 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.24■□□□□ 0.19
SDHBP21912 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.24■□□□□ 0.19
SDHBP21912 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.24■□□□□ 0.19
SDHBP21912 LINC00896-202ENST00000609602 2128 ntBASIC16.24■□□□□ 0.19
SDHBP21912 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SDHBP21912 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.24■□□□□ 0.19
SDHBP21912 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.24■□□□□ 0.19
SDHBP21912 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.24■□□□□ 0.19
SDHBP21912 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.24■□□□□ 0.19
SDHBP21912 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.24■□□□□ 0.19
SDHBP21912 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 RNA5SP412-201ENST00000516234 123 ntBASIC16.24■□□□□ 0.19
SDHBP21912 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SDHBP21912 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.24■□□□□ 0.19
SDHBP21912 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.24■□□□□ 0.19
SDHBP21912 AC073389.1-201ENST00000595595 795 ntBASIC16.24■□□□□ 0.19
SDHBP21912 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.24■□□□□ 0.19
SDHBP21912 AC106872.11-201ENST00000605838 421 ntBASIC16.24■□□□□ 0.19
SDHBP21912 AL139099.5-201ENST00000635274 300 ntBASIC16.24■□□□□ 0.19
SDHBP21912 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SDHBP21912 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms