Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC2P18074 AC006449.5-201ENST00000610658 2098 ntBASIC17.08■□□□□ 0.33
ERCC2P18074 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC2P18074 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ERCC2P18074 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.08■□□□□ 0.33
ERCC2P18074 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.08■□□□□ 0.32
ERCC2P18074 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ERCC2P18074 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.08■□□□□ 0.32
ERCC2P18074 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
ERCC2P18074 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ERCC2P18074 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.08■□□□□ 0.32
ERCC2P18074 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.08■□□□□ 0.32
ERCC2P18074 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.08■□□□□ 0.32
ERCC2P18074 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.08■□□□□ 0.32
ERCC2P18074 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ERCC2P18074 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ERCC2P18074 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ERCC2P18074 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERCC2P18074 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ERCC2P18074 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC2P18074 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ERCC2P18074 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 PMS2P7-201ENST00000506558 1336 ntBASIC17.07■□□□□ 0.32
ERCC2P18074 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ERCC2P18074 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.07■□□□□ 0.32
ERCC2P18074 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ERCC2P18074 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ERCC2P18074 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC2P18074 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC2P18074 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ERCC2P18074 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 LINC01144-201ENST00000626198 1710 ntBASIC17.07■□□□□ 0.32
ERCC2P18074 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.07■□□□□ 0.32
ERCC2P18074 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ERCC2P18074 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC2P18074 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ERCC2P18074 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ERCC2P18074 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC2P18074 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC2P18074 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.06■□□□□ 0.32
ERCC2P18074 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC2P18074 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.06■□□□□ 0.32
ERCC2P18074 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.06■□□□□ 0.32
ERCC2P18074 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.06■□□□□ 0.32
ERCC2P18074 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC2P18074 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
ERCC2P18074 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ERCC2P18074 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC2P18074 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.06■□□□□ 0.32
ERCC2P18074 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ERCC2P18074 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC2P18074 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC2P18074 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ERCC2P18074 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ERCC2P18074 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
ERCC2P18074 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms