Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PTPN1P18031 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 UBALD1-205ENST00000590891 2641 ntBASIC17.57■□□□□ 0.4
PTPN1P18031 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN1P18031 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.57■□□□□ 0.4
PTPN1P18031 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PTPN1P18031 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN1P18031 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.57■□□□□ 0.4
PTPN1P18031 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN1P18031 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN1P18031 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN1P18031 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
PTPN1P18031 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTPN1P18031 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN1P18031 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN1P18031 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTPN1P18031 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN1P18031 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 MIR346-201ENST00000362234 95 ntBASIC17.56■□□□□ 0.4
PTPN1P18031 AL139400.1-201ENST00000366220 510 ntBASIC17.56■□□□□ 0.4
PTPN1P18031 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PTPN1P18031 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN1P18031 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN1P18031 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN1P18031 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN1P18031 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN1P18031 AC020765.3-201ENST00000613051 740 ntBASIC17.56■□□□□ 0.4
PTPN1P18031 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN1P18031 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.56■□□□□ 0.4
PTPN1P18031 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.56■□□□□ 0.4
PTPN1P18031 AC084121.4-201ENST00000641598 221 ntBASIC17.56■□□□□ 0.4
PTPN1P18031 AF228730.8-201ENST00000642140 221 ntBASIC17.56■□□□□ 0.4
PTPN1P18031 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN1P18031 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN1P18031 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN1P18031 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PTPN1P18031 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN1P18031 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PTPN1P18031 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN1P18031 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 FLJ38576-201ENST00000623820 2459 ntBASIC17.55■□□□□ 0.4
PTPN1P18031 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN1P18031 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN1P18031 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN1P18031 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 TSEN15P1-201ENST00000423257 515 ntBASIC17.55■□□□□ 0.4
PTPN1P18031 KRT18P32-201ENST00000424695 1287 ntBASIC17.55■□□□□ 0.4
PTPN1P18031 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN1P18031 METTL21AP1-201ENST00000438852 635 ntBASIC17.55■□□□□ 0.4
PTPN1P18031 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN1P18031 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN1P18031 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN1P18031 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN1P18031 AP000842.3-202ENST00000569238 1080 ntBASIC17.55■□□□□ 0.4
PTPN1P18031 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN1P18031 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN1P18031 AC009093.7-201ENST00000623853 1223 ntBASIC17.55■□□□□ 0.4
PTPN1P18031 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PTPN1P18031 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN1P18031 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN1P18031 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
PTPN1P18031 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PTPN1P18031 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN1P18031 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN1P18031 AGGF1P2-201ENST00000426656 2106 ntBASIC17.54■□□□□ 0.4
PTPN1P18031 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN1P18031 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN1P18031 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPN1P18031 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms