Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.26■□□□□ 0.19
PCNAP12004 AC018712.1-201ENST00000455767 687 ntBASIC16.26■□□□□ 0.19
PCNAP12004 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.26■□□□□ 0.19
PCNAP12004 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.26■□□□□ 0.19
PCNAP12004 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.26■□□□□ 0.19
PCNAP12004 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.26■□□□□ 0.19
PCNAP12004 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.26■□□□□ 0.19
PCNAP12004 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PCNAP12004 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 AP002414.3-201ENST00000589352 1468 ntBASIC16.26■□□□□ 0.19
PCNAP12004 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.26■□□□□ 0.19
PCNAP12004 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.26■□□□□ 0.19
PCNAP12004 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCNAP12004 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 TOP3BP1-201ENST00000420768 1380 ntBASIC16.26■□□□□ 0.19
PCNAP12004 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.26■□□□□ 0.19
PCNAP12004 AC002310.6-201ENST00000624451 1377 ntBASIC16.26■□□□□ 0.19
PCNAP12004 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.25■□□□□ 0.19
PCNAP12004 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCNAP12004 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PCNAP12004 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.25■□□□□ 0.19
PCNAP12004 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.25■□□□□ 0.19
PCNAP12004 AC073621.1-201ENST00000392730 636 ntBASIC16.25■□□□□ 0.19
PCNAP12004 FAAHP1-202ENST00000446499 1238 ntBASIC16.25■□□□□ 0.19
PCNAP12004 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.25■□□□□ 0.19
PCNAP12004 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 AC012640.2-201ENST00000561606 901 ntBASIC16.25■□□□□ 0.19
PCNAP12004 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.25■□□□□ 0.19
PCNAP12004 AL356488.2-201ENST00000602755 427 ntBASIC16.25■□□□□ 0.19
PCNAP12004 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.25■□□□□ 0.19
PCNAP12004 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCNAP12004 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PCNAP12004 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCNAP12004 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
PCNAP12004 HLA-A-202ENST00000376806 1854 ntBASIC16.25■□□□□ 0.19
PCNAP12004 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCNAP12004 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNAP12004 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNAP12004 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 AC092364.2-201ENST00000596710 2692 ntBASIC16.24■□□□□ 0.19
PCNAP12004 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PCNAP12004 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PCNAP12004 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 PAUPAR-201ENST00000630360 2965 ntBASIC16.24■□□□□ 0.19
PCNAP12004 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNAP12004 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.24■□□□□ 0.19
PCNAP12004 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.24■□□□□ 0.19
PCNAP12004 SLC25A6P2-201ENST00000497974 877 ntBASIC16.24■□□□□ 0.19
PCNAP12004 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.24■□□□□ 0.19
PCNAP12004 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNAP12004 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.24■□□□□ 0.19
PCNAP12004 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.24■□□□□ 0.19
PCNAP12004 GGTLC5P-201ENST00000617623 998 ntBASIC16.24■□□□□ 0.19
PCNAP12004 AC005593.1-201ENST00000624894 515 ntBASIC16.24■□□□□ 0.19
PCNAP12004 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCNAP12004 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms