Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.61■□□□□ 0.57
HOXC6P09630 AC055876.2-201ENST00000531834 546 ntBASIC18.61■□□□□ 0.57
HOXC6P09630 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.61■□□□□ 0.57
HOXC6P09630 AC061975.2-201ENST00000581722 295 ntBASIC18.61■□□□□ 0.57
HOXC6P09630 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXC6P09630 AC099568.2-201ENST00000609194 695 ntBASIC18.61■□□□□ 0.57
HOXC6P09630 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXC6P09630 AL033527.5-202ENST00000641632 1098 ntBASIC18.61■□□□□ 0.57
HOXC6P09630 AL139011.1-202ENST00000642063 584 ntBASIC18.61■□□□□ 0.57
HOXC6P09630 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC6P09630 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC6P09630 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HOXC6P09630 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HOXC6P09630 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
HOXC6P09630 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC6P09630 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXC6P09630 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC6P09630 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.6■□□□□ 0.57
HOXC6P09630 SRD5A3P1-201ENST00000603021 949 ntBASIC18.6■□□□□ 0.57
HOXC6P09630 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.6■□□□□ 0.57
HOXC6P09630 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HOXC6P09630 AL645608.8-201ENST00000606034 2086 ntBASIC18.6■□□□□ 0.57
HOXC6P09630 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC6P09630 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXC6P09630 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC6P09630 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXC6P09630 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.59■□□□□ 0.57
HOXC6P09630 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HOXC6P09630 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 MEP1AP4-201ENST00000423244 1087 ntBASIC18.59■□□□□ 0.57
HOXC6P09630 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.59■□□□□ 0.57
HOXC6P09630 AC022494.1-201ENST00000466044 728 ntBASIC18.59■□□□□ 0.57
HOXC6P09630 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXC6P09630 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 SDHAP3-202ENST00000515467 728 ntBASIC18.59■□□□□ 0.57
HOXC6P09630 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 MIR6799-201ENST00000620297 69 ntBASIC18.59■□□□□ 0.57
HOXC6P09630 AC007431.3-201ENST00000623221 587 ntBASIC18.59■□□□□ 0.57
HOXC6P09630 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.59■□□□□ 0.57
HOXC6P09630 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXC6P09630 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC6P09630 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC6P09630 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC6P09630 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HOXC6P09630 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC6P09630 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC6P09630 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.58■□□□□ 0.57
HOXC6P09630 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC6P09630 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
HOXC6P09630 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC6P09630 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC6P09630 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC6P09630 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HOXC6P09630 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HOXC6P09630 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.58■□□□□ 0.56
HOXC6P09630 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HOXC6P09630 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 MIR1909-201ENST00000411312 80 ntBASIC18.58■□□□□ 0.56
HOXC6P09630 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.58■□□□□ 0.56
HOXC6P09630 RPS2P32-201ENST00000439199 892 ntBASIC18.58■□□□□ 0.56
HOXC6P09630 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.58■□□□□ 0.56
HOXC6P09630 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.58■□□□□ 0.56
HOXC6P09630 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms