Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COL5A2P05997 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COL5A2P05997 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL5A2P05997 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL5A2P05997 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC21.49■■□□□ 1.03
COL5A2P05997 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL5A2P05997 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.48■■□□□ 1.03
COL5A2P05997 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.48■■□□□ 1.03
COL5A2P05997 RPL13P2-201ENST00000440687 659 ntBASIC21.48■■□□□ 1.03
COL5A2P05997 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC21.48■■□□□ 1.03
COL5A2P05997 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.48■■□□□ 1.03
COL5A2P05997 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COL5A2P05997 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.48■■□□□ 1.03
COL5A2P05997 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.48■■□□□ 1.03
COL5A2P05997 AC244093.1-201ENST00000610837 814 ntBASIC21.48■■□□□ 1.03
COL5A2P05997 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COL5A2P05997 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.48■■□□□ 1.03
COL5A2P05997 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.48■■□□□ 1.03
COL5A2P05997 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL5A2P05997 AC067852.2-201ENST00000590513 2313 ntBASIC21.48■■□□□ 1.03
COL5A2P05997 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL5A2P05997 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL5A2P05997 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL5A2P05997 AL390961.4-201ENST00000623958 2535 ntBASIC21.47■■□□□ 1.03
COL5A2P05997 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL5A2P05997 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL5A2P05997 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL5A2P05997 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL5A2P05997 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL5A2P05997 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL5A2P05997 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.47■■□□□ 1.03
COL5A2P05997 AC004945.1-201ENST00000416738 983 ntBASIC21.47■■□□□ 1.03
COL5A2P05997 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC21.47■■□□□ 1.03
COL5A2P05997 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.47■■□□□ 1.03
COL5A2P05997 FO681548.1-201ENST00000455617 1132 ntBASIC21.47■■□□□ 1.03
COL5A2P05997 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.47■■□□□ 1.03
COL5A2P05997 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.47■■□□□ 1.03
COL5A2P05997 AP002490.2-201ENST00000524791 560 ntBASIC21.47■■□□□ 1.03
COL5A2P05997 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.47■■□□□ 1.03
COL5A2P05997 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.47■■□□□ 1.03
COL5A2P05997 AC124283.3-201ENST00000570869 594 ntBASIC21.47■■□□□ 1.03
COL5A2P05997 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL5A2P05997 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.47■■□□□ 1.03
COL5A2P05997 AC068587.10-201ENST00000641210 219 ntBASIC21.47■■□□□ 1.03
COL5A2P05997 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.47■■□□□ 1.03
COL5A2P05997 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL5A2P05997 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL5A2P05997 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
COL5A2P05997 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL5A2P05997 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.47■■□□□ 1.03
COL5A2P05997 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.46■■□□□ 1.03
COL5A2P05997 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.46■■□□□ 1.03
COL5A2P05997 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
COL5A2P05997 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.46■■□□□ 1.03
COL5A2P05997 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
COL5A2P05997 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC21.46■■□□□ 1.03
COL5A2P05997 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.46■■□□□ 1.03
COL5A2P05997 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.46■■□□□ 1.03
COL5A2P05997 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 KRT8P22-201ENST00000562317 1415 ntBASIC21.46■■□□□ 1.03
COL5A2P05997 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
COL5A2P05997 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
COL5A2P05997 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
COL5A2P05997 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COL5A2P05997 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.46■■□□□ 1.03
COL5A2P05997 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL5A2P05997 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL5A2P05997 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
COL5A2P05997 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL5A2P05997 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL5A2P05997 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL5A2P05997 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
COL5A2P05997 AC005229.1-201ENST00000392885 409 ntBASIC21.45■■□□□ 1.03
COL5A2P05997 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.45■■□□□ 1.03
COL5A2P05997 ACTG1P3-201ENST00000431775 1114 ntBASIC21.45■■□□□ 1.03
COL5A2P05997 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.45■■□□□ 1.03
COL5A2P05997 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.45■■□□□ 1.03
COL5A2P05997 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL5A2P05997 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
COL5A2P05997 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
COL5A2P05997 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.45■■□□□ 1.03
COL5A2P05997 AL022328.1-201ENST00000610050 478 ntBASIC21.45■■□□□ 1.03
COL5A2P05997 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
COL5A2P05997 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
COL5A2P05997 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.45■■□□□ 1.02
COL5A2P05997 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
COL5A2P05997 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL5A2P05997 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL5A2P05997 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL5A2P05997 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
COL5A2P05997 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms