Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
POLR3DP05423 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR3DP05423 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
POLR3DP05423 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR3DP05423 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR3DP05423 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.84■□□□□ 0.77
POLR3DP05423 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
POLR3DP05423 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.84■□□□□ 0.77
POLR3DP05423 LINC01225-203ENST00000563550 1244 ntBASIC19.84■□□□□ 0.77
POLR3DP05423 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR3DP05423 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.84■□□□□ 0.77
POLR3DP05423 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.84■□□□□ 0.77
POLR3DP05423 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.84■□□□□ 0.77
POLR3DP05423 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR3DP05423 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
POLR3DP05423 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
POLR3DP05423 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
POLR3DP05423 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.84■□□□□ 0.77
POLR3DP05423 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
POLR3DP05423 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.84■□□□□ 0.77
POLR3DP05423 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR3DP05423 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
POLR3DP05423 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.83■□□□□ 0.77
POLR3DP05423 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR3DP05423 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
POLR3DP05423 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
POLR3DP05423 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
POLR3DP05423 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.83■□□□□ 0.77
POLR3DP05423 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.83■□□□□ 0.77
POLR3DP05423 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.83■□□□□ 0.77
POLR3DP05423 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
POLR3DP05423 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.83■□□□□ 0.77
POLR3DP05423 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.83■□□□□ 0.77
POLR3DP05423 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
POLR3DP05423 KRT8P23-201ENST00000560090 1207 ntBASIC19.83■□□□□ 0.77
POLR3DP05423 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.83■□□□□ 0.77
POLR3DP05423 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR3DP05423 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR3DP05423 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR3DP05423 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR3DP05423 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.83■□□□□ 0.76
POLR3DP05423 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.83■□□□□ 0.76
POLR3DP05423 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR3DP05423 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR3DP05423 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR3DP05423 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
POLR3DP05423 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR3DP05423 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR3DP05423 AC124067.4-201ENST00000519691 2379 ntBASIC19.83■□□□□ 0.76
POLR3DP05423 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR3DP05423 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
POLR3DP05423 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR3DP05423 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.83■□□□□ 0.76
POLR3DP05423 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 AL671710.1-201ENST00000610245 2349 ntBASIC19.82■□□□□ 0.76
POLR3DP05423 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.82■□□□□ 0.76
POLR3DP05423 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.82■□□□□ 0.76
POLR3DP05423 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.82■□□□□ 0.76
POLR3DP05423 AC027307.2-201ENST00000591252 911 ntBASIC19.82■□□□□ 0.76
POLR3DP05423 AC013467.2-201ENST00000605472 835 ntBASIC19.82■□□□□ 0.76
POLR3DP05423 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 LINC00895-201ENST00000629028 1637 ntBASIC19.82■□□□□ 0.76
POLR3DP05423 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
POLR3DP05423 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
POLR3DP05423 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
POLR3DP05423 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.82■□□□□ 0.76
POLR3DP05423 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR3DP05423 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR3DP05423 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR3DP05423 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR3DP05423 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR3DP05423 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR3DP05423 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR3DP05423 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms