Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 AC087499.1-201ENST00000418141 1075 ntBASIC17.85■□□□□ 0.45
TUBB4AP04350 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
TUBB4AP04350 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.85■□□□□ 0.45
TUBB4AP04350 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.85■□□□□ 0.45
TUBB4AP04350 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.85■□□□□ 0.45
TUBB4AP04350 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.85■□□□□ 0.45
TUBB4AP04350 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.85■□□□□ 0.45
TUBB4AP04350 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.85■□□□□ 0.45
TUBB4AP04350 PCGF3-213ENST00000620529 1899 ntBASIC17.85■□□□□ 0.45
TUBB4AP04350 AC092919.2-201ENST00000623631 1645 ntBASIC17.85■□□□□ 0.45
TUBB4AP04350 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.85■□□□□ 0.45
TUBB4AP04350 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TUBB4AP04350 AC138035.3-201ENST00000622706 2791 ntBASIC17.85■□□□□ 0.45
TUBB4AP04350 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TUBB4AP04350 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TUBB4AP04350 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 AC067930.6-201ENST00000623257 4947 ntBASIC17.84■□□□□ 0.45
TUBB4AP04350 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBB4AP04350 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.84■□□□□ 0.45
TUBB4AP04350 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBB4AP04350 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBB4AP04350 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.84■□□□□ 0.45
TUBB4AP04350 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBB4AP04350 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBB4AP04350 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TUBB4AP04350 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 MMP23A-201ENST00000234610 1017 ntBASIC17.84■□□□□ 0.45
TUBB4AP04350 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBB4AP04350 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.84■□□□□ 0.45
TUBB4AP04350 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBB4AP04350 AC141257.4-201ENST00000634557 245 ntBASIC17.84■□□□□ 0.45
TUBB4AP04350 AC136944.6-201ENST00000634818 245 ntBASIC17.84■□□□□ 0.45
TUBB4AP04350 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBB4AP04350 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBB4AP04350 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBB4AP04350 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBB4AP04350 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBB4AP04350 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBB4AP04350 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
TUBB4AP04350 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBB4AP04350 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TUBB4AP04350 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TUBB4AP04350 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBB4AP04350 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBB4AP04350 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBB4AP04350 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TUBB4AP04350 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.83■□□□□ 0.45
TUBB4AP04350 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.83■□□□□ 0.45
TUBB4AP04350 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBB4AP04350 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBB4AP04350 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TUBB4AP04350 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.83■□□□□ 0.44
TUBB4AP04350 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBB4AP04350 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.83■□□□□ 0.44
TUBB4AP04350 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TUBB4AP04350 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TUBB4AP04350 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TUBB4AP04350 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.83■□□□□ 0.44
TUBB4AP04350 AL390719.2-201ENST00000606993 987 ntBASIC17.83■□□□□ 0.44
TUBB4AP04350 AL353801.3-201ENST00000609898 542 ntBASIC17.83■□□□□ 0.44
TUBB4AP04350 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.83■□□□□ 0.44
TUBB4AP04350 AC133561.5-201ENST00000635547 218 ntBASIC17.83■□□□□ 0.44
TUBB4AP04350 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TUBB4AP04350 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBB4AP04350 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBB4AP04350 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBB4AP04350 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBB4AP04350 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBB4AP04350 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms