Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CNOT4O95628 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CNOT4O95628 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.8□□□□□ -0.04
CNOT4O95628 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CNOT4O95628 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.8□□□□□ -0.04
CNOT4O95628 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CNOT4O95628 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CNOT4O95628 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.79□□□□□ -0.04
CNOT4O95628 FAM58CP-201ENST00000435741 640 ntBASIC14.79□□□□□ -0.04
CNOT4O95628 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.79□□□□□ -0.04
CNOT4O95628 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.79□□□□□ -0.04
CNOT4O95628 AL009183.1-201ENST00000603760 355 ntBASIC14.79□□□□□ -0.04
CNOT4O95628 AC092053.1-201ENST00000605787 1936 ntBASIC14.79□□□□□ -0.04
CNOT4O95628 AC084018.2-201ENST00000613093 2607 ntBASIC14.79□□□□□ -0.04
CNOT4O95628 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.79□□□□□ -0.04
CNOT4O95628 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CNOT4O95628 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.79□□□□□ -0.04
CNOT4O95628 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNOT4O95628 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CNOT4O95628 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.78□□□□□ -0.04
CNOT4O95628 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 AC006277.1-201ENST00000624348 1610 ntBASIC14.78□□□□□ -0.04
CNOT4O95628 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CNOT4O95628 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.78□□□□□ -0.04
CNOT4O95628 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 RNU1-129P-201ENST00000384064 167 ntBASIC14.78□□□□□ -0.04
CNOT4O95628 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.78□□□□□ -0.04
CNOT4O95628 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.78□□□□□ -0.04
CNOT4O95628 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.78□□□□□ -0.04
CNOT4O95628 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.78□□□□□ -0.04
CNOT4O95628 CEND1P1-201ENST00000451006 455 ntBASIC14.78□□□□□ -0.04
CNOT4O95628 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.78□□□□□ -0.04
CNOT4O95628 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.78□□□□□ -0.04
CNOT4O95628 U1.21-201ENST00000580816 167 ntBASIC14.78□□□□□ -0.04
CNOT4O95628 CYP2A7P1-201ENST00000595391 815 ntBASIC14.78□□□□□ -0.04
CNOT4O95628 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.78□□□□□ -0.04
CNOT4O95628 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.78□□□□□ -0.04
CNOT4O95628 AC021097.1-201ENST00000607902 574 ntBASIC14.78□□□□□ -0.04
CNOT4O95628 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.78□□□□□ -0.04
CNOT4O95628 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.78□□□□□ -0.04
CNOT4O95628 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNOT4O95628 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CNOT4O95628 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CNOT4O95628 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CNOT4O95628 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms