Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC098818.2-201ENST00000564925 2320 ntBASIC24.46■■□□□ 1.51
RAPGEF3O95398 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF3O95398 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF3O95398 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC24.46■■□□□ 1.51
RAPGEF3O95398 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF3O95398 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF3O95398 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC24.46■■□□□ 1.51
RAPGEF3O95398 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF3O95398 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RAPGEF3O95398 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF3O95398 FXNP2-201ENST00000411625 547 ntBASIC24.46■■□□□ 1.51
RAPGEF3O95398 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC24.46■■□□□ 1.51
RAPGEF3O95398 AP001258.2-201ENST00000529891 490 ntBASIC24.46■■□□□ 1.51
RAPGEF3O95398 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
RAPGEF3O95398 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
RAPGEF3O95398 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC24.46■■□□□ 1.51
RAPGEF3O95398 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAPGEF3O95398 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC24.45■■□□□ 1.51
RAPGEF3O95398 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC24.45■■□□□ 1.51
RAPGEF3O95398 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
RAPGEF3O95398 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
RAPGEF3O95398 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RAPGEF3O95398 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
RAPGEF3O95398 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 AL355864.2-201ENST00000447420 863 ntBASIC24.45■■□□□ 1.5
RAPGEF3O95398 AC106760.1-201ENST00000508690 800 ntBASIC24.45■■□□□ 1.5
RAPGEF3O95398 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 AC105129.2-201ENST00000559536 390 ntBASIC24.45■■□□□ 1.5
RAPGEF3O95398 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 CYP4F24P-201ENST00000586049 1580 ntBASIC24.45■■□□□ 1.5
RAPGEF3O95398 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPGEF3O95398 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC24.45■■□□□ 1.5
RAPGEF3O95398 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC24.44■■□□□ 1.5
RAPGEF3O95398 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 TUBB8P12-201ENST00000308911 1335 ntBASIC24.44■■□□□ 1.5
RAPGEF3O95398 TUBB7P-202ENST00000428444 1305 ntBASIC24.44■■□□□ 1.5
RAPGEF3O95398 TUBB8P7-204ENST00000567960 1332 ntBASIC24.44■■□□□ 1.5
RAPGEF3O95398 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC24.44■■□□□ 1.5
RAPGEF3O95398 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC24.44■■□□□ 1.5
RAPGEF3O95398 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC24.44■■□□□ 1.5
RAPGEF3O95398 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC24.44■■□□□ 1.5
RAPGEF3O95398 AL022328.3-201ENST00000607943 679 ntBASIC24.44■■□□□ 1.5
RAPGEF3O95398 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RAPGEF3O95398 AL607033.1-201ENST00000623900 1599 ntBASIC24.44■■□□□ 1.5
RAPGEF3O95398 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
RAPGEF3O95398 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPGEF3O95398 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC24.44■■□□□ 1.5
RAPGEF3O95398 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF3O95398 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
RAPGEF3O95398 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF3O95398 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF3O95398 RPL13P2-201ENST00000440687 659 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF3O95398 FAM86LP-201ENST00000478302 853 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC24.43■■□□□ 1.5
RAPGEF3O95398 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF3O95398 ENPP7P5-201ENST00000541031 1031 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 KRT90P-201ENST00000549264 1064 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC24.43■■□□□ 1.5
RAPGEF3O95398 CLUHP6-201ENST00000580789 941 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC24.43■■□□□ 1.5
RAPGEF3O95398 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 AC015967.2-201ENST00000624092 234 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 AC006435.4-201ENST00000625037 234 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 AL356737.1-201ENST00000634391 234 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 AC008687.7-202ENST00000637404 953 ntBASIC24.43■■□□□ 1.5
RAPGEF3O95398 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF3O95398 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPGEF3O95398 RELA-227ENST00000615805 2236 ntTSL 5 BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms