Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDH8O95206 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH8O95206 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDH8O95206 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDH8O95206 DUX4L27-201ENST00000554796 1261 ntBASIC16.58■□□□□ 0.24
PCDH8O95206 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDH8O95206 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.58■□□□□ 0.24
PCDH8O95206 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDH8O95206 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDH8O95206 MIR6080-201ENST00000617359 66 ntBASIC16.58■□□□□ 0.24
PCDH8O95206 AC084121.4-201ENST00000641598 221 ntBASIC16.58■□□□□ 0.24
PCDH8O95206 AF228730.8-201ENST00000642140 221 ntBASIC16.58■□□□□ 0.24
PCDH8O95206 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDH8O95206 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH8O95206 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH8O95206 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH8O95206 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCDH8O95206 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH8O95206 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH8O95206 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH8O95206 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH8O95206 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDH8O95206 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDH8O95206 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PCDH8O95206 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PCDH8O95206 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.57■□□□□ 0.24
PCDH8O95206 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDH8O95206 SPDYE14P-201ENST00000442619 822 ntBASIC16.57■□□□□ 0.24
PCDH8O95206 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDH8O95206 AC105233.2-201ENST00000523697 349 ntBASIC16.57■□□□□ 0.24
PCDH8O95206 AF228730.5-201ENST00000530288 346 ntBASIC16.57■□□□□ 0.24
PCDH8O95206 AC015911.4-201ENST00000588022 1070 ntBASIC16.57■□□□□ 0.24
PCDH8O95206 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDH8O95206 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDH8O95206 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.57■□□□□ 0.24
PCDH8O95206 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDH8O95206 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDH8O95206 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCDH8O95206 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDH8O95206 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH8O95206 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH8O95206 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH8O95206 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDH8O95206 AC008677.1-201ENST00000519230 1561 ntBASIC16.56■□□□□ 0.24
PCDH8O95206 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.56■□□□□ 0.24
PCDH8O95206 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH8O95206 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 AL645728.1-201ENST00000366221 2101 ntBASIC16.56■□□□□ 0.24
PCDH8O95206 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH8O95206 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
PCDH8O95206 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDH8O95206 KLF2P3-201ENST00000451977 1087 ntBASIC16.56■□□□□ 0.24
PCDH8O95206 AC125807.1-201ENST00000483097 614 ntBASIC16.56■□□□□ 0.24
PCDH8O95206 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH8O95206 PRYP6-201ENST00000514804 343 ntBASIC16.56■□□□□ 0.24
PCDH8O95206 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDH8O95206 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH8O95206 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH8O95206 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDH8O95206 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDH8O95206 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDH8O95206 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 1594.9 ms