Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 CSH2-202ENST00000345366 598 ntTSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 KRTAP10-13P-201ENST00000412914 571 ntBASIC7.28□□□□□ -1.24
USH2AO75445 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC7.28□□□□□ -1.24
USH2AO75445 AC245884.6-201ENST00000515672 1067 ntBASIC7.28□□□□□ -1.24
USH2AO75445 AL049840.4-201ENST00000602422 811 ntBASIC7.28□□□□□ -1.24
USH2AO75445 RHOXF1P1-202ENST00000635473 501 ntBASIC7.28□□□□□ -1.24
USH2AO75445 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 KRT8P37-201ENST00000451609 1420 ntBASIC7.28□□□□□ -1.24
USH2AO75445 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC7.28□□□□□ -1.24
USH2AO75445 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC7.28□□□□□ -1.24
USH2AO75445 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC7.28□□□□□ -1.24
USH2AO75445 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC7.28□□□□□ -1.24
USH2AO75445 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC7.28□□□□□ -1.24
USH2AO75445 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 AL451050.2-201ENST00000606967 682 ntBASIC7.28□□□□□ -1.24
USH2AO75445 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC7.28□□□□□ -1.24
USH2AO75445 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC7.28□□□□□ -1.24
USH2AO75445 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USH2AO75445 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
USH2AO75445 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC7.28□□□□□ -1.24
USH2AO75445 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
USH2AO75445 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
USH2AO75445 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
USH2AO75445 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
USH2AO75445 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC7.27□□□□□ -1.24
USH2AO75445 AC044849.1-201ENST00000519737 1188 ntBASIC7.27□□□□□ -1.24
USH2AO75445 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC7.27□□□□□ -1.24
USH2AO75445 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.24
USH2AO75445 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC7.27□□□□□ -1.24
USH2AO75445 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC7.27□□□□□ -1.25
USH2AO75445 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 STK4-201ENST00000372801 2038 ntTSL 2 BASIC7.27□□□□□ -1.25
USH2AO75445 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
USH2AO75445 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC7.27□□□□□ -1.25
USH2AO75445 RPL8-205ENST00000527914 551 ntTSL 3 BASIC7.27□□□□□ -1.25
USH2AO75445 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
USH2AO75445 CENPX-208ENST00000584347 799 ntTSL 2 BASIC7.27□□□□□ -1.25
USH2AO75445 AP001527.2-201ENST00000614441 631 ntBASIC7.27□□□□□ -1.25
USH2AO75445 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
USH2AO75445 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC7.27□□□□□ -1.25
USH2AO75445 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC7.27□□□□□ -1.25
USH2AO75445 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 RNA5SP410-201ENST00000516285 106 ntBASIC7.27□□□□□ -1.25
USH2AO75445 PTP4A1P2-201ENST00000546033 454 ntBASIC7.27□□□□□ -1.25
USH2AO75445 NAA38-207ENST00000576861 556 ntTSL 3 BASIC7.27□□□□□ -1.25
USH2AO75445 LARP4-220ENST00000615080 856 ntTSL 5 BASIC7.27□□□□□ -1.25
USH2AO75445 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
USH2AO75445 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC7.27□□□□□ -1.25
USH2AO75445 AL031598.1-201ENST00000561511 1773 ntBASIC7.27□□□□□ -1.25
USH2AO75445 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
USH2AO75445 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC7.27□□□□□ -1.25
USH2AO75445 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC7.27□□□□□ -1.25
USH2AO75445 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
USH2AO75445 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC7.27□□□□□ -1.25
USH2AO75445 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC7.27□□□□□ -1.25
USH2AO75445 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
USH2AO75445 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
USH2AO75445 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC7.27□□□□□ -1.25
USH2AO75445 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC7.27□□□□□ -1.25
USH2AO75445 AC091812.3-201ENST00000621362 345 ntBASIC7.27□□□□□ -1.25
USH2AO75445 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms