Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM3O75382 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM3O75382 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 AC002310.6-201ENST00000624451 1377 ntBASIC15.55■□□□□ 0.08
TRIM3O75382 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM3O75382 BX842568.4-201ENST00000421222 227 ntBASIC15.55■□□□□ 0.08
TRIM3O75382 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
TRIM3O75382 RHOQP3-201ENST00000437982 621 ntBASIC15.55■□□□□ 0.08
TRIM3O75382 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.55■□□□□ 0.08
TRIM3O75382 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM3O75382 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM3O75382 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM3O75382 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM3O75382 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM3O75382 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM3O75382 AC010507.1-201ENST00000633895 436 ntBASIC15.55■□□□□ 0.08
TRIM3O75382 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM3O75382 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM3O75382 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM3O75382 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM3O75382 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM3O75382 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 AC129492.6-201ENST00000611383 1305 ntBASIC15.54■□□□□ 0.08
TRIM3O75382 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM3O75382 AC023274.1-201ENST00000418278 595 ntBASIC15.54■□□□□ 0.08
TRIM3O75382 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM3O75382 AC004832.2-201ENST00000426397 482 ntBASIC15.54■□□□□ 0.08
TRIM3O75382 FAM185BP-201ENST00000443595 716 ntBASIC15.54■□□□□ 0.08
TRIM3O75382 CXCL1P1-201ENST00000502804 216 ntBASIC15.54■□□□□ 0.08
TRIM3O75382 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRIM3O75382 AC018845.2-201ENST00000568326 409 ntBASIC15.54■□□□□ 0.08
TRIM3O75382 AC002347.1-201ENST00000569543 541 ntBASIC15.54■□□□□ 0.08
TRIM3O75382 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM3O75382 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM3O75382 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM3O75382 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM3O75382 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM3O75382 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM3O75382 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM3O75382 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM3O75382 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRIM3O75382 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM3O75382 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM3O75382 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM3O75382 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM3O75382 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM3O75382 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM3O75382 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM3O75382 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM3O75382 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM3O75382 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM3O75382 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM3O75382 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM3O75382 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms