Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16■□□□□ 0.15
CPNE3O75131 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16■□□□□ 0.15
CPNE3O75131 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16■□□□□ 0.15
CPNE3O75131 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
CPNE3O75131 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16■□□□□ 0.15
CPNE3O75131 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 RARRES2P8-201ENST00000566335 367 ntBASIC16■□□□□ 0.15
CPNE3O75131 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 CD7-202ENST00000578509 925 ntTSL 3 BASIC16■□□□□ 0.15
CPNE3O75131 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16■□□□□ 0.15
CPNE3O75131 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16■□□□□ 0.15
CPNE3O75131 AC093028.1-201ENST00000622998 982 ntBASIC16■□□□□ 0.15
CPNE3O75131 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16■□□□□ 0.15
CPNE3O75131 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CPNE3O75131 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE3O75131 AC103702.1-201ENST00000548801 2630 ntBASIC15.99■□□□□ 0.15
CPNE3O75131 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CPNE3O75131 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE3O75131 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE3O75131 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE3O75131 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE3O75131 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.99■□□□□ 0.15
CPNE3O75131 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE3O75131 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
CPNE3O75131 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.99■□□□□ 0.15
CPNE3O75131 AC106028.4-201ENST00000614509 607 ntBASIC15.99■□□□□ 0.15
CPNE3O75131 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.99■□□□□ 0.15
CPNE3O75131 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE3O75131 AC008741.2-201ENST00000612792 3115 ntBASIC15.99■□□□□ 0.15
CPNE3O75131 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 PKD1P5-201ENST00000532415 10291 ntBASIC15.99■□□□□ 0.15
CPNE3O75131 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE3O75131 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CPNE3O75131 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.99■□□□□ 0.15
CPNE3O75131 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE3O75131 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE3O75131 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CPNE3O75131 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CPNE3O75131 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CPNE3O75131 AKAP8P1-201ENST00000434743 1349 ntBASIC15.98■□□□□ 0.15
CPNE3O75131 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CPNE3O75131 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CPNE3O75131 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 AL139400.1-201ENST00000366220 510 ntBASIC15.98■□□□□ 0.15
CPNE3O75131 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 TFAMP1-201ENST00000412727 736 ntBASIC15.98■□□□□ 0.15
CPNE3O75131 AL627223.1-201ENST00000416693 442 ntBASIC15.98■□□□□ 0.15
CPNE3O75131 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.98■□□□□ 0.15
CPNE3O75131 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.98■□□□□ 0.15
CPNE3O75131 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.98■□□□□ 0.15
CPNE3O75131 AC109635.5-201ENST00000533593 962 ntBASIC15.98■□□□□ 0.15
CPNE3O75131 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.98■□□□□ 0.15
CPNE3O75131 AC025678.2-201ENST00000562061 970 ntBASIC15.98■□□□□ 0.15
CPNE3O75131 AL009183.1-201ENST00000603760 355 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms