Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HCN1O60741 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.6■□□□□ 0.09
HCN1O60741 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
HCN1O60741 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HCN1O60741 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HCN1O60741 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.6■□□□□ 0.09
HCN1O60741 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HCN1O60741 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.6■□□□□ 0.09
HCN1O60741 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
HCN1O60741 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.6■□□□□ 0.09
HCN1O60741 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.6■□□□□ 0.09
HCN1O60741 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.6■□□□□ 0.09
HCN1O60741 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.6■□□□□ 0.09
HCN1O60741 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
HCN1O60741 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HCN1O60741 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HCN1O60741 PCDHB17P-201ENST00000539533 2393 ntBASIC15.6■□□□□ 0.09
HCN1O60741 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HCN1O60741 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.59■□□□□ 0.09
HCN1O60741 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HCN1O60741 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HCN1O60741 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.59■□□□□ 0.09
HCN1O60741 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HCN1O60741 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.59■□□□□ 0.09
HCN1O60741 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 LINC02199-201ENST00000506655 2702 ntBASIC15.59■□□□□ 0.09
HCN1O60741 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
HCN1O60741 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.59■□□□□ 0.09
HCN1O60741 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HCN1O60741 YBX2P1-201ENST00000394192 760 ntBASIC15.59■□□□□ 0.09
HCN1O60741 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.59■□□□□ 0.09
HCN1O60741 UPF3AP3-201ENST00000420996 769 ntBASIC15.59■□□□□ 0.09
HCN1O60741 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.59■□□□□ 0.09
HCN1O60741 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.59■□□□□ 0.09
HCN1O60741 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
HCN1O60741 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.59■□□□□ 0.09
HCN1O60741 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.59■□□□□ 0.09
HCN1O60741 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.59■□□□□ 0.09
HCN1O60741 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.59■□□□□ 0.09
HCN1O60741 MIR3687-2-201ENST00000577708 61 ntBASIC15.59■□□□□ 0.09
HCN1O60741 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.59■□□□□ 0.09
HCN1O60741 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.59■□□□□ 0.09
HCN1O60741 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.59■□□□□ 0.09
HCN1O60741 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.59■□□□□ 0.09
HCN1O60741 MIR3687-1-201ENST00000614492 61 ntBASIC15.59■□□□□ 0.09
HCN1O60741 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HCN1O60741 AC004790.2-201ENST00000623588 572 ntBASIC15.59■□□□□ 0.09
HCN1O60741 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HCN1O60741 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HCN1O60741 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HCN1O60741 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
HCN1O60741 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HCN1O60741 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.59■□□□□ 0.09
HCN1O60741 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HCN1O60741 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HCN1O60741 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HCN1O60741 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
HCN1O60741 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HCN1O60741 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.58■□□□□ 0.09
HCN1O60741 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.58■□□□□ 0.09
HCN1O60741 AC078925.2-201ENST00000624013 1973 ntBASIC15.58■□□□□ 0.09
HCN1O60741 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
HCN1O60741 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HCN1O60741 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HCN1O60741 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HCN1O60741 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms