Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.93■□□□□ 0.14
GFRA3O60609 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.93■□□□□ 0.14
GFRA3O60609 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
GFRA3O60609 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
GFRA3O60609 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.93■□□□□ 0.14
GFRA3O60609 C2orf27AP3-201ENST00000434123 579 ntBASIC15.93■□□□□ 0.14
GFRA3O60609 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.93■□□□□ 0.14
GFRA3O60609 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.93■□□□□ 0.14
GFRA3O60609 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.93■□□□□ 0.14
GFRA3O60609 AL354718.3-201ENST00000616414 581 ntBASIC15.93■□□□□ 0.14
GFRA3O60609 CR382287.1-201ENST00000623954 586 ntBASIC15.93■□□□□ 0.14
GFRA3O60609 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.93■□□□□ 0.14
GFRA3O60609 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.93■□□□□ 0.14
GFRA3O60609 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.93■□□□□ 0.14
GFRA3O60609 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.93■□□□□ 0.14
GFRA3O60609 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 KRT8P37-201ENST00000451609 1420 ntBASIC15.93■□□□□ 0.14
GFRA3O60609 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.93■□□□□ 0.14
GFRA3O60609 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 AC134312.5-201ENST00000568031 1313 ntBASIC15.93■□□□□ 0.14
GFRA3O60609 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.92■□□□□ 0.14
GFRA3O60609 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
GFRA3O60609 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.92■□□□□ 0.14
GFRA3O60609 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
GFRA3O60609 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.92■□□□□ 0.14
GFRA3O60609 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.92■□□□□ 0.14
GFRA3O60609 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.92■□□□□ 0.14
GFRA3O60609 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.92■□□□□ 0.14
GFRA3O60609 AC005702.4-201ENST00000618393 416 ntBASIC15.92■□□□□ 0.14
GFRA3O60609 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.92■□□□□ 0.14
GFRA3O60609 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
GFRA3O60609 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
GFRA3O60609 AC006480.2-201ENST00000609770 1337 ntBASIC15.92■□□□□ 0.14
GFRA3O60609 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
GFRA3O60609 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GFRA3O60609 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.91■□□□□ 0.14
GFRA3O60609 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GFRA3O60609 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.91■□□□□ 0.14
GFRA3O60609 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.91■□□□□ 0.14
GFRA3O60609 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GFRA3O60609 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms