Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MID1O15344 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
MID1O15344 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.59■□□□□ 0.25
MID1O15344 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.59■□□□□ 0.25
MID1O15344 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.59■□□□□ 0.25
MID1O15344 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.59■□□□□ 0.25
MID1O15344 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
MID1O15344 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MID1O15344 AL645608.8-201ENST00000606034 2086 ntBASIC16.59■□□□□ 0.25
MID1O15344 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 AC092580.3-201ENST00000430932 139 ntBASIC16.59■□□□□ 0.25
MID1O15344 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.59■□□□□ 0.25
MID1O15344 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
MID1O15344 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.59■□□□□ 0.25
MID1O15344 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.59■□□□□ 0.25
MID1O15344 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.59■□□□□ 0.25
MID1O15344 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.59■□□□□ 0.25
MID1O15344 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.59■□□□□ 0.25
MID1O15344 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.59■□□□□ 0.25
MID1O15344 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MID1O15344 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.59■□□□□ 0.25
MID1O15344 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.59■□□□□ 0.25
MID1O15344 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.59■□□□□ 0.25
MID1O15344 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MID1O15344 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.59■□□□□ 0.25
MID1O15344 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MID1O15344 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MID1O15344 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MID1O15344 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
MID1O15344 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MID1O15344 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MID1O15344 HLA-H-201ENST00000383620 1096 ntBASIC16.58■□□□□ 0.24
MID1O15344 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MID1O15344 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.58■□□□□ 0.24
MID1O15344 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
MID1O15344 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.58■□□□□ 0.24
MID1O15344 UGT1A2P-201ENST00000454886 866 ntBASIC16.58■□□□□ 0.24
MID1O15344 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MID1O15344 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.58■□□□□ 0.24
MID1O15344 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MID1O15344 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.58■□□□□ 0.24
MID1O15344 AC138761.1-201ENST00000584393 385 ntBASIC16.58■□□□□ 0.24
MID1O15344 SPTSSB-204ENST00000617024 1292 ntBASIC16.58■□□□□ 0.24
MID1O15344 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MID1O15344 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.58■□□□□ 0.24
MID1O15344 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.58■□□□□ 0.24
MID1O15344 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MID1O15344 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.58■□□□□ 0.24
MID1O15344 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MID1O15344 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MID1O15344 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MID1O15344 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.57■□□□□ 0.24
MID1O15344 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.57■□□□□ 0.24
MID1O15344 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MID1O15344 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
MID1O15344 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
MID1O15344 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MID1O15344 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MID1O15344 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MID1O15344 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
MID1O15344 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MID1O15344 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.57■□□□□ 0.24
MID1O15344 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.57■□□□□ 0.24
MID1O15344 AL512652.2-201ENST00000625156 1716 ntBASIC16.57■□□□□ 0.24
MID1O15344 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.57■□□□□ 0.24
MID1O15344 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MID1O15344 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.57■□□□□ 0.24
MID1O15344 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.57■□□□□ 0.24
MID1O15344 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MID1O15344 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MID1O15344 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.57■□□□□ 0.24
MID1O15344 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.57■□□□□ 0.24
MID1O15344 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MID1O15344 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
MID1O15344 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.57■□□□□ 0.24
MID1O15344 TSPY16P-201ENST00000449843 468 ntBASIC16.57■□□□□ 0.24
MID1O15344 AL512638.1-201ENST00000457493 794 ntBASIC16.57■□□□□ 0.24
MID1O15344 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MID1O15344 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.57■□□□□ 0.24
MID1O15344 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms