Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.73■□□□□ 0.43
O00370 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 AC005052.1-201ENST00000625181 2492 ntBASIC17.73■□□□□ 0.43
O00370 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
O00370 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
O00370 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.72■□□□□ 0.43
O00370 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.72■□□□□ 0.43
O00370 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.72■□□□□ 0.43
O00370 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.72■□□□□ 0.43
O00370 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.72■□□□□ 0.43
O00370 AC074386.1-202ENST00000463561 864 ntBASIC17.72■□□□□ 0.43
O00370 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
O00370 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.72■□□□□ 0.43
O00370 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.72■□□□□ 0.43
O00370 AL031055.1-201ENST00000606362 631 ntBASIC17.72■□□□□ 0.43
O00370 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.72■□□□□ 0.43
O00370 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
O00370 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
O00370 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.72■□□□□ 0.43
O00370 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.72■□□□□ 0.43
O00370 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
O00370 AL596257.1-201ENST00000641463 2694 ntBASIC17.72■□□□□ 0.43
O00370 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
O00370 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
O00370 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
O00370 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.72■□□□□ 0.43
O00370 MST1L-201ENST00000442552 2185 ntBASIC17.72■□□□□ 0.43
O00370 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.71■□□□□ 0.43
O00370 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
O00370 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.71■□□□□ 0.43
O00370 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.71■□□□□ 0.43
O00370 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.71■□□□□ 0.43
O00370 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
O00370 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
O00370 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.71■□□□□ 0.43
O00370 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 AC140658.5-201ENST00000438532 169 ntBASIC17.71■□□□□ 0.43
O00370 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.71■□□□□ 0.43
O00370 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.71■□□□□ 0.43
O00370 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.71■□□□□ 0.43
O00370 MIR3909-201ENST00000579518 119 ntBASIC17.71■□□□□ 0.43
O00370 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.71■□□□□ 0.43
O00370 AC068137.2-201ENST00000605408 478 ntBASIC17.71■□□□□ 0.43
O00370 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
O00370 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
O00370 AC006449.5-201ENST00000610658 2098 ntBASIC17.71■□□□□ 0.43
O00370 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
O00370 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.71■□□□□ 0.43
O00370 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
O00370 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
O00370 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
O00370 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
O00370 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.71■□□□□ 0.43
O00370 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
O00370 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.71■□□□□ 0.42
O00370 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.71■□□□□ 0.42
O00370 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
O00370 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
O00370 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
O00370 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
O00370 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
O00370 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.7■□□□□ 0.42
O00370 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.7■□□□□ 0.42
O00370 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms