Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
USP17L11C9JVI0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 PIN1P1-201ENST00000412108 996 ntBASIC19.18■□□□□ 0.66
USP17L11C9JVI0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP17L11C9JVI0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 AC022211.2-201ENST00000585075 2527 ntBASIC19.17■□□□□ 0.66
USP17L11C9JVI0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 AC098859.1-201ENST00000502915 1238 ntBASIC19.17■□□□□ 0.66
USP17L11C9JVI0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 AC105020.1-201ENST00000435356 2205 ntBASIC19.17■□□□□ 0.66
USP17L11C9JVI0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP17L11C9JVI0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 AL391256.1-201ENST00000443260 1855 ntBASIC19.16■□□□□ 0.66
USP17L11C9JVI0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 AL358472.5-202ENST00000641448 1267 ntBASIC19.16■□□□□ 0.66
USP17L11C9JVI0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 SNX33P1-201ENST00000592116 1762 ntBASIC19.16■□□□□ 0.66
USP17L11C9JVI0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP17L11C9JVI0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms