Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC196A0A1B0GTZ2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC046158.3-201ENST00000624947 2558 ntBASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC023274.1-201ENST00000418278 595 ntBASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 MCCD1P2-201ENST00000423228 335 ntBASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC004832.2-201ENST00000426397 482 ntBASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 AL671883.3-201ENST00000603274 991 ntBASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 ALOX12P2-203ENST00000570921 1945 ntBASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC196A0A1B0GTZ2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 AC092919.2-201ENST00000623631 1645 ntBASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 AP000347.1-202ENST00000435868 847 ntBASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 POU5F1P6-201ENST00000466990 990 ntBASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC196A0A1B0GTZ2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC196A0A1B0GTZ2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms