Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 AC099522.2-201ENST00000607001 744 ntBASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 SNX33P1-201ENST00000592116 1762 ntBASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A3BPQ9Y5P4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 KRT8P39-201ENST00000396270 1433 ntBASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A3BPQ9Y5P4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 ADH5P3-201ENST00000433842 1137 ntBASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.58■□□□□ 0.56
COL4A3BPQ9Y5P4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 AP000344.2-201ENST00000512987 629 ntBASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.57■□□□□ 0.56
COL4A3BPQ9Y5P4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A3BPQ9Y5P4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL4A3BPQ9Y5P4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.56■□□□□ 0.56
COL4A3BPQ9Y5P4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A3BPQ9Y5P4 AL671710.1-201ENST00000610245 2349 ntBASIC18.56■□□□□ 0.56
COL4A3BPQ9Y5P4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A3BPQ9Y5P4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms