Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC002558.1-201ENST00000488906 803 ntBASIC15.8■□□□□ 0.12
LHX6Q9UPM6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 AL137246.1-201ENST00000607072 977 ntBASIC15.8■□□□□ 0.12
LHX6Q9UPM6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 PCDHA12-202ENST00000613593 2588 ntBASIC15.79■□□□□ 0.12
LHX6Q9UPM6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 DFFBP1-201ENST00000433250 979 ntBASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 BNIP3P42-201ENST00000454982 569 ntBASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 BNIP3P29-201ENST00000598302 571 ntBASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AC244093.1-201ENST00000610837 814 ntBASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AL138828.2-201ENST00000615812 383 ntBASIC15.79■□□□□ 0.12
LHX6Q9UPM6 AC011447.5-201ENST00000616168 564 ntBASIC15.79■□□□□ 0.12
LHX6Q9UPM6 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.79■□□□□ 0.12
LHX6Q9UPM6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 AC124067.4-201ENST00000519691 2379 ntBASIC15.78■□□□□ 0.12
LHX6Q9UPM6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 AC008494.3-201ENST00000606615 944 ntBASIC15.78■□□□□ 0.12
LHX6Q9UPM6 AC008738.7-201ENST00000609744 511 ntBASIC15.78■□□□□ 0.12
LHX6Q9UPM6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 MIR6775-201ENST00000617557 69 ntBASIC15.78■□□□□ 0.12
LHX6Q9UPM6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX6Q9UPM6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms