Protein–RNA interactions for Protein: Q9UHB7

AFF4, AF4/FMR2 family member 4, humanhuman

Known RBP Predictions only

Length 1,163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4Q9UHB7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AFF4Q9UHB7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AFF4Q9UHB7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.49■□□□□ 0.39
AFF4Q9UHB7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
AFF4Q9UHB7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
AFF4Q9UHB7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 AC106820.2-201ENST00000563775 3264 ntBASIC17.48■□□□□ 0.39
AFF4Q9UHB7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.48■□□□□ 0.39
AFF4Q9UHB7 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 HLA-H-201ENST00000383620 1096 ntBASIC17.48■□□□□ 0.39
AFF4Q9UHB7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.48■□□□□ 0.39
AFF4Q9UHB7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.47■□□□□ 0.39
AFF4Q9UHB7 AC092580.3-201ENST00000430932 139 ntBASIC17.47■□□□□ 0.39
AFF4Q9UHB7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 AC138761.1-201ENST00000584393 385 ntBASIC17.47■□□□□ 0.39
AFF4Q9UHB7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 AC003101.2-201ENST00000612557 442 ntBASIC17.47■□□□□ 0.39
AFF4Q9UHB7 AC007967.4-201ENST00000614700 386 ntBASIC17.47■□□□□ 0.39
AFF4Q9UHB7 SPTSSB-204ENST00000617024 1292 ntBASIC17.47■□□□□ 0.39
AFF4Q9UHB7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 AL391256.1-201ENST00000443260 1855 ntBASIC17.47■□□□□ 0.39
AFF4Q9UHB7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AFF4Q9UHB7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 FAM220BP-201ENST00000377689 816 ntBASIC17.46■□□□□ 0.39
AFF4Q9UHB7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AFF4Q9UHB7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms