Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 GK-202ENST00000378941 458 ntTSL 3 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.95■□□□□ 0.3
EBF1Q9UH73 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.95■□□□□ 0.3
EBF1Q9UH73 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
EBF1Q9UH73 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
EBF1Q9UH73 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 PCDHB19P-201ENST00000570871 2371 ntBASIC16.94■□□□□ 0.3
EBF1Q9UH73 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.94■□□□□ 0.3
EBF1Q9UH73 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 AP000842.3-202ENST00000569238 1080 ntBASIC16.94■□□□□ 0.3
EBF1Q9UH73 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 MIR6080-201ENST00000617359 66 ntBASIC16.94■□□□□ 0.3
EBF1Q9UH73 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.94■□□□□ 0.3
EBF1Q9UH73 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EBF1Q9UH73 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 AL358472.5-202ENST00000641448 1267 ntBASIC16.93■□□□□ 0.3
EBF1Q9UH73 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
EBF1Q9UH73 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EBF1Q9UH73 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms