Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 AC236430.1-201ENST00000402231 743 ntBASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 UGT1A2P-201ENST00000454886 866 ntBASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 AC027369.6-201ENST00000525520 931 ntBASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 AC073439.1-201ENST00000624121 1774 ntBASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 HLA-H-201ENST00000383620 1096 ntBASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 AC092580.3-201ENST00000430932 139 ntBASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 AC002472.2-201ENST00000442739 958 ntBASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 SPTSSB-204ENST00000617024 1292 ntBASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.02■□□□□ 0.16
LRIT1Q9P2V4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 OR6D1P-203ENST00000641209 4860 ntBASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LRIT1Q9P2V4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 FOXO1B-201ENST00000504678 1527 ntBASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 AC241585.1-201ENST00000433527 519 ntBASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 TERF1P3-201ENST00000505638 1227 ntBASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 RN7SL204P-201ENST00000582831 262 ntBASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 AC073592.8-201ENST00000624126 511 ntBASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 AP001094.4-201ENST00000579008 2176 ntBASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRIT1Q9P2V4 AL391256.1-201ENST00000443260 1855 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms