Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 AC091812.2-201ENST00000619081 385 ntBASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
BLOC1S4Q9NUP1 OR6D1P-202ENST00000641007 5290 ntBASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 REXO1L8P-201ENST00000604378 1897 ntBASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 AC004832.2-201ENST00000426397 482 ntBASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 AC092902.6-201ENST00000641783 218 ntBASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 AL391005.1-201ENST00000623953 2435 ntBASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 PMS2P7-201ENST00000506558 1336 ntBASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BLOC1S4Q9NUP1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 AC026691.1-201ENST00000602502 2017 ntBASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 AC018695.7-201ENST00000624587 2492 ntBASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 AC002056.1-201ENST00000395613 760 ntBASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 AC002347.1-201ENST00000569543 541 ntBASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 AC005622.1-201ENST00000636801 1703 ntBASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
BLOC1S4Q9NUP1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 WASH6P-202ENST00000359512 1437 ntBASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 ADH5P3-201ENST00000433842 1137 ntBASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
BLOC1S4Q9NUP1 AC112191.1-201ENST00000523689 701 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms