Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 HCG4-201ENST00000418983 998 ntBASIC14.24□□□□□ -0.13
GCM1Q9NP62 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 PDPK2P-202ENST00000562415 1191 ntBASIC14.24□□□□□ -0.13
GCM1Q9NP62 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 AC012569.1-201ENST00000591191 1524 ntBASIC14.24□□□□□ -0.13
GCM1Q9NP62 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AC004832.2-201ENST00000426397 482 ntBASIC14.23□□□□□ -0.13
GCM1Q9NP62 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AP002490.2-201ENST00000524791 560 ntBASIC14.23□□□□□ -0.13
GCM1Q9NP62 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AC087641.1-201ENST00000557561 1021 ntBASIC14.23□□□□□ -0.13
GCM1Q9NP62 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AL031432.2-201ENST00000566714 459 ntBASIC14.23□□□□□ -0.13
GCM1Q9NP62 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AL928711.1-201ENST00000570165 459 ntBASIC14.23□□□□□ -0.13
GCM1Q9NP62 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AP001350.2-201ENST00000625104 1094 ntBASIC14.23□□□□□ -0.13
GCM1Q9NP62 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AC005915.1-201ENST00000624912 2018 ntBASIC14.23□□□□□ -0.13
GCM1Q9NP62 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 AC105020.1-201ENST00000435356 2205 ntBASIC14.23□□□□□ -0.13
GCM1Q9NP62 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.23□□□□□ -0.13
GCM1Q9NP62 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GCM1Q9NP62 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms