Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.05■□□□□ 0.32
SP110Q9HB58 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.05■□□□□ 0.32
SP110Q9HB58 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.05■□□□□ 0.32
SP110Q9HB58 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.05■□□□□ 0.32
SP110Q9HB58 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.05■□□□□ 0.32
SP110Q9HB58 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SP110Q9HB58 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.05■□□□□ 0.32
SP110Q9HB58 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
SP110Q9HB58 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SP110Q9HB58 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SP110Q9HB58 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.05■□□□□ 0.32
SP110Q9HB58 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SP110Q9HB58 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SP110Q9HB58 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SP110Q9HB58 AC092919.2-201ENST00000623631 1645 ntBASIC17.04■□□□□ 0.32
SP110Q9HB58 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.04■□□□□ 0.32
SP110Q9HB58 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SP110Q9HB58 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.04■□□□□ 0.32
SP110Q9HB58 AC140658.5-201ENST00000438532 169 ntBASIC17.04■□□□□ 0.32
SP110Q9HB58 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
SP110Q9HB58 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.04■□□□□ 0.32
SP110Q9HB58 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.04■□□□□ 0.32
SP110Q9HB58 MIR3909-201ENST00000579518 119 ntBASIC17.04■□□□□ 0.32
SP110Q9HB58 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.04■□□□□ 0.32
SP110Q9HB58 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.04■□□□□ 0.32
SP110Q9HB58 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.04■□□□□ 0.32
SP110Q9HB58 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.04■□□□□ 0.32
SP110Q9HB58 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.04■□□□□ 0.32
SP110Q9HB58 AL512652.2-201ENST00000625156 1716 ntBASIC17.04■□□□□ 0.32
SP110Q9HB58 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.04■□□□□ 0.32
SP110Q9HB58 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.04■□□□□ 0.32
SP110Q9HB58 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SP110Q9HB58 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.03■□□□□ 0.32
SP110Q9HB58 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SP110Q9HB58 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.03■□□□□ 0.32
SP110Q9HB58 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SP110Q9HB58 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.03■□□□□ 0.32
SP110Q9HB58 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SP110Q9HB58 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SP110Q9HB58 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 PMS2P4-201ENST00000412466 1052 ntBASIC17.03■□□□□ 0.32
SP110Q9HB58 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.03■□□□□ 0.32
SP110Q9HB58 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SP110Q9HB58 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.03■□□□□ 0.32
SP110Q9HB58 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.03■□□□□ 0.32
SP110Q9HB58 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.03■□□□□ 0.32
SP110Q9HB58 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 AL009183.1-201ENST00000603760 355 ntBASIC17.03■□□□□ 0.32
SP110Q9HB58 AC021097.1-201ENST00000607902 574 ntBASIC17.03■□□□□ 0.32
SP110Q9HB58 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.03■□□□□ 0.32
SP110Q9HB58 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.03■□□□□ 0.32
SP110Q9HB58 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP110Q9HB58 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.03■□□□□ 0.32
SP110Q9HB58 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms