Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 MIR648-201ENST00000385046 94 ntBASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 AC139887.3-201ENST00000568585 713 ntBASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 AC069148.1-201ENST00000608741 768 ntBASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 AC020765.3-201ENST00000613051 740 ntBASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 AL805961.1-202ENST00000641562 540 ntBASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 SLC22A20-204ENST00000530038 1673 ntBASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 AC132008.2-207ENST00000454517 770 ntBASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 AP005117.1-202ENST00000581724 1908 ntBASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHACTR1Q9C0D0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PHACTR1Q9C0D0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PHACTR1Q9C0D0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.89■□□□□ 0.3
PHACTR1Q9C0D0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PHACTR1Q9C0D0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.89■□□□□ 0.3
PHACTR1Q9C0D0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PHACTR1Q9C0D0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHACTR1Q9C0D0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms