Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 KRT8P19-201ENST00000551916 1455 ntBASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CNTNAP3Q9BZ76 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 AC114501.2-201ENST00000439631 535 ntBASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 AC114501.1-201ENST00000445949 172 ntBASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 USP32P1-208ENST00000506594 1164 ntBASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 AL033527.5-201ENST00000641382 801 ntBASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNTNAP3Q9BZ76 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 AC098850.1-201ENST00000419919 790 ntBASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 UPF3AP2-201ENST00000457924 1132 ntBASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 KRT18P34-201ENST00000488218 1270 ntBASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 AL138918.1-201ENST00000568306 659 ntBASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNTNAP3Q9BZ76 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms