Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 TSSC2-201ENST00000450217 709 ntBASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 AC092329.2-201ENST00000598402 547 ntBASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFAF3Q9BU61 AC013268.4-201ENST00000637413 2228 ntBASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 AC007191.1-201ENST00000623179 2995 ntBASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 AC107918.4-201ENST00000641966 3141 ntBASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 HLA-F-220ENST00000434407 884 ntBASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 SPDYE13P-201ENST00000445314 798 ntBASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 KRT8P26-201ENST00000534154 1276 ntBASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFAF3Q9BU61 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NDUFAF3Q9BU61 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms