Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 AC024563.2-201ENST00000603282 481 ntBASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 AC024243.1-201ENST00000609234 778 ntBASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 AC019129.2-201ENST00000609837 1235 ntBASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 TMEM191A-211ENST00000637163 1067 ntBASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB3IPQ96QF0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 AL359258.3-201ENST00000622910 2331 ntBASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 SLC25A1P2-201ENST00000430693 912 ntBASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB3IPQ96QF0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 AC104581.4-201ENST00000623126 3052 ntBASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 AL109954.1-202ENST00000564051 2148 ntBASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB3IPQ96QF0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms