Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PGBD1Q96JS3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 AC002347.1-201ENST00000569543 541 ntBASIC19.31■□□□□ 0.68
PGBD1Q96JS3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 AC023141.13-201ENST00000604991 943 ntBASIC19.31■□□□□ 0.68
PGBD1Q96JS3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.31■□□□□ 0.68
PGBD1Q96JS3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 KRT8P49-201ENST00000604166 1432 ntBASIC19.31■□□□□ 0.68
PGBD1Q96JS3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 TOP3BP1-201ENST00000420768 1380 ntBASIC19.31■□□□□ 0.68
PGBD1Q96JS3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.31■□□□□ 0.68
PGBD1Q96JS3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 SNX33P1-201ENST00000592116 1762 ntBASIC19.3■□□□□ 0.68
PGBD1Q96JS3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.3■□□□□ 0.68
PGBD1Q96JS3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 HLA-J-202ENST00000469281 1241 ntBASIC19.3■□□□□ 0.68
PGBD1Q96JS3 ALG1L5P-201ENST00000482043 771 ntBASIC19.3■□□□□ 0.68
PGBD1Q96JS3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 323.9 ms