Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 PMS2P1-201ENST00000431037 1228 ntBASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHAMP1Q96JM3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 REXO1L3P-201ENST00000622202 1288 ntBASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 AC002310.6-201ENST00000624451 1377 ntBASIC19.31■□□□□ 0.68
CHAMP1Q96JM3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 POM121L3P-201ENST00000419331 1163 ntBASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 PAWRP1-201ENST00000451083 565 ntBASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 MPDU1-223ENST00000582151 728 ntBASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 AL591684.3-201ENST00000605187 298 ntBASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 AL139011.1-202ENST00000642063 584 ntBASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 TOP3BP1-201ENST00000420768 1380 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms